Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0209 ATGGCTCCGAGCTTCTTCATCCCGAAAAGCTCCCGCATACGACAACTTCAACTTCAATCCAATTCCTTCCTTCATAAAAGGCGGCTGTGTCCTCTCCTTCTCTTACTCAATCACAACGCTTCTTTCACCTTCTTCTCTCTGAGCGAAACAACCCAGAACTCAAATCGAATGGATGCTAAGCGTCGAACGGTTCGCTCCCTTGTGGGCAAGCTGAGCTCTGTTTCAGAGCAAACCCAGCTCGATGCTCTGCGCGAGCTTCGATTGATGACCAAGCAGGACGAAGAAACCCGACCCTTGATCGCTGATTCGGGTGCGATTCCGCACTTGGCTGATTCCCTCTTCTCCTCTTCCCACGTTTTCCAAGACAACGCCTCTGCCACGCTTCTCAACATTTCGATTTCCTGTAGAGAACCTCTCATGTCCACGCGCGGAGTTCTTGATGCTATCTCGCACGTGCTTTCCCGCCATACCTCGACTTCGTCTGCTTCCGCCGTCCAATCCTGCGCCGCCACGTTGTACAGTCTCCTCATCGTCGATAACTACCGGCCTATCGTCGGTTCCAAGCGTGACATTGTGTACGCTCTCGTCGATATCATCAAAACCCCCAAATCGCCGATCAGATCGATCAAGGACGCTCTCAAGGCTCTGTTCGGAATCGCGCTTCATCCGCTTAATCGGTGCACGATGATCCAACTCGGTGTGGTTGAAGCTCTGTTCTCGTTGGTTCTGAAGGATCATAAGGTCGTCGGGATTGTGGAGGATGCGACGGCGGTGATAGCGCAAATCGCGGGATGCGAAGAGAGTGTGGAAGCGTTTCGGAAGGTGTCAGGAATGGGAGTGCTGGTTGATTTTCTGGATATGGCGAATAAGTCGAGCATGAAGACGAAGGAGAATGCTGTTTCTGGATTGCTGAAGCTAGTGAGATGTGGAGGGGAGAAAGTAGCCATGGATGTGAGAGTGAGAGCTTTAGGGGCATTTGATGGAATTACGGACGTGCAAGAGAACGGTAGCTCCAAAGGGAAGAGCAAGGCAGCGGCGTTATCGGCGGAATTGATCGGAGATGGAAACCATTGGACTACACAGAGGGATTCGCGGTTTGATTCCTCAACAAGTCAAGATTCATCTTTTTCATTCAATTTCTCAACTGATTCATCAGAATTTGTTGTGTAG 1170 0.5077 MAPSFFIPKSSRIRQLQLQSNSFLHKRRLCPLLLLLNHNASFTFFSLSETTQNSNRMDAKRRTVRSLVGKLSSVSEQTQLDALRELRLMTKQDEETRPLIADSGAIPHLADSLFSSSHVFQDNASATLLNISISCREPLMSTRGVLDAISHVLSRHTSTSSASAVQSCAATLYSLLIVDNYRPIVGSKRDIVYALVDIIKTPKSPIRSIKDALKALFGIALHPLNRCTMIQLGVVEALFSLVLKDHKVVGIVEDATAVIAQIAGCEESVEAFRKVSGMGVLVDFLDMANKSSMKTKENAVSGLLKLVRCGGEKVAMDVRVRALGAFDGITDVQENGSSKGKSKAAALSAELIGDGNHWTTQRDSRFDSSTSQDSSFSFNFSTDSSEFVV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0209 389 PANTHER U BOX DOMAIN-CONTAINING 62 352 - -
Lele10g0209 389 SUPERFAMILY ARM repeat 60 330 IPR016024 -
Lele10g0209 389 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 233 277 IPR000225 GO:0005515
Lele10g0209 389 MobiDBLite consensus disorder prediction 356 389 - -
Lele10g0209 389 SMART arm_5 222 264 IPR000225 GO:0005515
Lele10g0209 389 SMART arm_5 93 133 IPR000225 GO:0005515
Lele10g0209 389 SMART arm_5 265 308 IPR000225 GO:0005515
Lele10g0209 389 Gene3D - 45 362 IPR011989 -
Lele10g0209 389 FunFam ARM repeat superfamily protein 58 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0209 Lele-ChrLele10 1366991 1368160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0209 64 347 U-box Gene Family AT2G23140 32.404 2.49e-30 120