Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0208 ATGGAAGACAAAGAACCCCAACAATCTTCCGTTCATCATGACCATCCTCCTCCGTCTCTCCCCAATCATCACGATCATATTGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTCACCGCCGCCAGCGGCGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTTTGGAGGCGTACGAAGCTAAATGGGTGCTCCGTAACAGAGCTAAGCTCAAGGGCCATGATTGGGAGGACGTCGCCAGGTACGTGTCTTCACGCGCCAACTGTACCAAATCTGCTAAGACCCAAACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCCGAATCGGCGTCCGGGGATGCGTCGTCGTCTTGGCCTTTGTATTCGCGTCTTGATCTTCTCCTTCGTGGGACTGGGCCTACTCCGTGCACCACCACGCTGGCTGTGCCGCTTGCGGCTGCCGCATCGGCACCGTCTCAATTGCCACATCACCACGTGAATAACCAGGGTTTTGTGTTATTGGAGCCTCCGTTGGCGGCGGCTCAGCCTCCTCATCAACCACAACCGCCTCCGGTAGCCGCCGTGGCTCCTCCTCCGCTTGCCAACGCTCAAAACTCTCAAGGATCCAACGGTATTGACAGATTAGCCAAGGAAGATGGATTAGGGACAAACAAGTCATCAGATCAAGTGTCCAACAAGAACATGGATGAAATCCTGGACACAGATAGCAGCACACCAGCCCTGTATAGCCATTCGAAGGAGCACCCAACAAGGAGCAACAACACCACCAACAGGAAGAGGAAGACGAAGATGGATCATCGTAGCAACACGAAGAAGATGAAGCGGAGGAGCGGAGGAGAAGGGAAGATGAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGATGTGGTGGTGAGATCGGAGCAAGCGAGGATGGAGATGATGAAGGAGATAGAGAAGATGAGGGTGGAAGCAGAGGCCAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATCATTGCTAATACGCAGATAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGACTTAA 1125 0.5156 MEDKEPQQSSVHHDHPPPSLPNHHDHIDPVKEESPRKPVTAASGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPCTTTLAVPLAAAASAPSQLPHHHVNNQGFVLLEPPLAAAQPPHQPQPPPVAAVAPPPLANAQNSQGSNGIDRLAKEDGLGTNKSSDQVSNKNMDEILDTDSSTPALYSHSKEHPTRSNNTTNRKRKTKMDHRSNTKKMKRRSGGEGKMNEMGIAESIRWLADVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQIEIARIFASVNNKGVDSSLRIGRT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0208 374 MobiDBLite consensus disorder prediction 266 284 - -
Lele10g0208 374 MobiDBLite consensus disorder prediction 1 35 - -
Lele10g0208 374 FunFam Trihelix transcription factor ASIL2 53 118 - -
Lele10g0208 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 24 360 IPR044823 -
Lele10g0208 374 MobiDBLite consensus disorder prediction 183 293 - -
Lele10g0208 374 MobiDBLite consensus disorder prediction 184 201 - -
Lele10g0208 374 Pfam Myb/SANT-like DNA-binding domain 50 137 IPR044822 -
Lele10g0208 374 MobiDBLite consensus disorder prediction 1 53 - -
Lele10g0208 374 Coils Coil 317 337 - -
Lele10g0208 374 Gene3D - 53 118 - -
Lele10g0208 374 MobiDBLite consensus disorder prediction 226 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0208 Lele-ChrLele10 1354102 1356641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0208 17 189 Trihelix Transcription Factor Family AT3G14180 30.526 3.61e-19 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele10g0208 Myb_DNA-bind_4 2.8e-19 CL0123