Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0204 ATGAAAGTGCCTTGTTGTTCGGTTTGCCAAACGCGGTACAACGAGGAGCAGAGAGTTCCTCTTCTGCTCCAATGCGGGCATGGATTTTGCAGAGAATGTTTATCGAGAATGTTCTCGGCGTCCGTCGATACCACGTTGCCTTGTCCCAAGTGTCGCCATGTGTCTAATGTCGGCAACTCTGTTCAATCTCTTCGCAAGAACTACGCTGTCCTTGCGCTTATACACTCAGCTTCGAATGCATCCCGGTCGAATTTTGACGGTGATTTCACGGACGATGAAGAAGACGGGGACAATGACGACGAGTCTGTCATATTTGGCCATCGTGGATCCCAGACGTCGAGCTCAGGCAGGTGTGGACCTGTGATCGAGGTTGGGGTGCACCGGGAATTAAAATTCCTACGGCGGATTGGTGAGGGGAGGAGGGCCGGAATGGAAACATGGACGGCGGTGCTCAGTGGAGGCGGCAGAAATGGACAGTGCAGGCACTATGTAGCGGTGAAAAAGGTAGGAATAACAGAGGAGATGAATTTGAATTGGGGACGTGGACAGCTTGAGAATTTGCGTCGTGCATCTATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGGTGGACCAGAGTTTGTGTCTTGTGATGGACCGGTGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAAGGCAGACTCACTTTGGAGCAAGTCCTAAGGTATGGGGCTGACATTGCACGAGGGGTGGCTGAGCTTCATGCTGCAGGTGTTGTTTGCATGAATCTAAAGCCATCCAATCTTCTTCTTGATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCCGGAACTCTGAAGAAGCCTTCCTGTTGGAAGGCTCAACCAGAGCGTGACCCCTCGAGGATCCATTCATGTATGGAATGTATAGTCCTCAGCCCACATTACACAGCTCCGGAGGTTTGGGAGCCTGTTAAGAAGTCAAATTTATTCAGGGCTGATTCAATAGGTGTATCCAGAGAGTCAGATGCTTGGAGTTTTGGTTGTACTTTGGTGGAAATGTGCACGGGTTTTGTTCCCTGGGCTGGTCTAAATGCGGAGGAAATTTATCAAGCCGTTGTCAAGGCACGGAAATTGCCTCCACAGTATGCTTGTATTGTTGGAGGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGTGCAATGTTAGCTACATTTCTCCATCATTTGCAGGAACTACCATGCAGTCCTGCTGCAAGCCCTGATAAGGATTCTGTTGAATGCTCTGTCTCAAATGTGTTAGAAGCTTCCTCTCAAGCACTTGAATTGAAACTTCCTCAAGATTATGTGAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTTCTTGCAAAGGCTGTCTCAGTAAATGGTAGCAACTGTATATCTTCTATATTGGAAGCTCAAAATGCTGATGGGCAAACTGCTCTCCACTTGGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGCTGATGTCTTGGACAAAGATGGAGTTCCTCCACTTGCTTTTGCCTTAGCAGCTGGATCTCCGGAATGTGTTCGTATTCTTATCAAAAGAAATGCTAATGTGAGGTCTGAATTAGGAGATGGCCTTGGCCCATCTATTGTTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTATTATTGGCTGGAGCTCATCCAAATGAAGTTGACGACCAAGGTGAATCTATATTGCATTCTGCAGTTGCAAAGAACTATACAGATTGTGCTCTGGTGATACTAGAAAATGGGGGCTGCAGATCAATGGGGATCTTAAATTCAAAGAATCTGACACCGTTGCACTTGTGTGTGAAATCATGGAATGTGGCTATTGTGAAAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCTTTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAAAGATCATGCAATTGAGGGGAGGGAACTGGTTCGAATATTGCTTGCTGCAGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGCGTACAGCTTTGCATACAGCTGTCATAACTAATGATGTTGAGTTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACACCTCTTCACTTCGCTTTAGCTAGTGGAGCAAAATCATGTGTTAAATTGCTTCTATCTGCTGGGGCAAATTATAACTTGCAGGATGATGATGGTGACAATGCTTTGCACAAAGCTGCAAAGGCTGCAAAATTGGCACGTGAAAACCTTGACTGGCTCATTGTGATGCTAAGAAATCCTGATGCTGATGTTCACGTCAGAAACCACAGTGGGAGGACGCTACGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAGGCACTCATGGATAGAGGAGTTCATCTAACTCCTACAATGTTTGAAGTGGGAGATTGGGTGAAATTCAAAAGAACTGTCACAACTCCAACCTATGGGTGGCAAGGTGCTAGCTCAAAGAGCGTTGGCTTTGTGCAAAATGTTCCAAGCAGAGACAATCTCGTTGTTTCATTTTGTTCTGGAGACGCTCATGTTTTAGCAAATGAAGTTGTGAAAGTCATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAGGTTAAACAGCCCAGGTTTGGTTGGCGTGAACAGTCACGTGACAGCATAGGCACAGTATTATGCATTGATGATGATGGAATCCTACGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACGTCTACGAAGCATGGGTTAGGATCTGTAACACCAGGAAGCATTGGTATTGTATCTTCTATTAAACCAGACAGTAGCCTGCTGATAGAACTTAGCTATCTTACAACTCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTGCTCCTTTCAGGATTGGAGATCGGGTATGTGTGAAGCGAGCTGTTGCAGAACCTAGATGTGCTTGGGGAGGTGAGACTCATCATAGTGTTGGAAGAATTAGTGAGATTGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCATGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTGTCTTCCCCAAAATATGGATGGGAGGATGTTACTAGGAACAGTATTGGGGTAATTCATAGCTTGGAGGAAGATGGCGACATGGGTATTGCTTTCTGCTTCCGAAGTAAACCTTTTTCTTGCTGTGTCACTGATGTGGAGAAAGTGGCTCCCTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATGTGTTACTCAGCCTCGACTTGGATGGTCAAATGAATCACCAGCTACCGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTTTCAATGTGAGTGTCGCTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGTAGAACAACTTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCGTAGGAACCAGACAAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCAGTTGTACACAGTATACAGGATTCTGGATACTTGGAATTGGCTAGCTGTTTTCGTAAACAGAGGTACTTCGCTCATTATACAGAAGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGCATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTGAATCTCGAGGCGTTATAACCAGCATTCATGCTGACGGAGAAGTAAGGGTATTATTCTTTGGTTTGCCGGGTTTGTGGAGAGGAGATCCTGCAGACCTTGAGATTGAGCAGATGTTTGAAGTGGGGGAGTGGGTAAGATTGAAAGATAATGCAAATAATTGGAAATCCATCATACCGGGCAGCATCGGTATCGTACAAGGAATAGGATTTAATGGCGACGAATGGGACGGAAGCACTTGTGTTGGCTTTTGTGGGGAGCAAGAAAGTTGGGTTGGACCAACTTCCCATCTTGAAAGAGTTGACAAACTCTCTGTTGGGCAGAAGGTTAGAGTTAAGCAAACCATAAAGAATCCAAGATTTGGTTGGGCAGGCCACAACCATGCCCGCGTCGGAACCATATCAGCAATCGATGCTGAGGGAAAGCTTAGAATATACACTCCACCGGGATCAAAGGCATGGATGTTGGACCCATCAGAAGTAGAATTAGTGGAGGAGGAGGAGATACAAATTGGGAACTGGGTGAAGGTTAGAGCATTGGTTTCAACACCAACCCACCAGTGGGGAGAAGTGGGTCAATCGAGCATCGGGGTGGTACATCGGATGGAAGGCGAGGATCTGTGGGTGTCATTCTGTTTCATGGAGAGACTATGGCTTTGTAAGGCATGGGAAATGGAAAAGGTGAGGCCATTCAAAAATGGGGACAAGGTAAGGATCAGAGATGGAATTGTGAGTCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGATGCTAATGGAAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAGCCCTGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA 4854 0.4615 MKVPCCSVCQTRYNEEQRVPLLLQCGHGFCRECLSRMFSASVDTTLPCPKCRHVSNVGNSVQSLRKNYAVLALIHSASNASRSNFDGDFTDDEEDGDNDDESVIFGHRGSQTSSSGRCGPVIEVGVHRELKFLRRIGEGRRAGMETWTAVLSGGGRNGQCRHYVAVKKVGITEEMNLNWGRGQLENLRRASMWCRNVCTFHGVMEVDQSLCLVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVAELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLAGTLKKPSCWKAQPERDPSRIHSCMECIVLSPHYTAPEVWEPVKKSNLFRADSIGVSRESDAWSFGCTLVEMCTGFVPWAGLNAEEIYQAVVKARKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLATFLHHLQELPCSPAASPDKDSVECSVSNVLEASSQALELKLPQDYVNHLHRLVSEGNVRGVRHLLAKAVSVNGSNCISSILEAQNADGQTALHLACRRGSAELVEAILACKEADADVLDKDGVPPLAFALAAGSPECVRILIKRNANVRSELGDGLGPSIVHICAYHGQPECMRELLLAGAHPNEVDDQGESILHSAVAKNYTDCALVILENGGCRSMGILNSKNLTPLHLCVKSWNVAIVKRWVEVATSDEIAEAIDIPNPFGTALCMAAASKKDHAIEGRELVRILLAAGADPSAQDSQYGRTALHTAVITNDVELVKVILAAGVDVNIRNEQNSTPLHFALASGAKSCVKLLLSAGANYNLQDDDGDNALHKAAKAAKLARENLDWLIVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALMDRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQGASSKSVGFVQNVPSRDNLVVSFCSGDAHVLANEVVKVIPLDRGQHVQLKSEVKQPRFGWREQSRDSIGTVLCIDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSTKHGLGSVTPGSIGIVSSIKPDSSLLIELSYLTTPWHCEPEEVEHVAPFRIGDRVCVKRAVAEPRCAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVGDWVKIKSSVSSPKYGWEDVTRNSIGVIHSLEEDGDMGIAFCFRSKPFSCCVTDVEKVAPLEAGQEIHVMPCVTQPRLGWSNESPATVGKIVTIDMDGAFNVSVAGRQSLWKVSPGDVEQLSGFEVGDWVRSKPSVGTRQSYDWNGAVKDGIAVVHSIQDSGYLELASCFRKQRYFAHYTEVEKVPCFKVGQHVRFRTGLVEPRWGWRGAQAESRGVITSIHADGEVRVLFFGLPGLWRGDPADLEIEQMFEVGEWVRLKDNANNWKSIIPGSIGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDKLSVGQKVRVKQTIKNPRFGWAGHNHARVGTISAIDAEGKLRIYTPPGSKAWMLDPSEVELVEEEEIQIGNWVKVRALVSTPTHQWGEVGQSSIGVVHRMEGEDLWVSFCFMERLWLCKAWEMEKVRPFKNGDKVRIRDGIVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0204 1617 SUPERFAMILY RING/U-box 5 61 - -
Lele10g0204 1617 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat profile. 538 570 IPR002110 GO:0005515
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat region circular profile. 504 525 - -
Lele10g0204 1617 SMART ANK_2a 641 672 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 573 602 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 679 714 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 504 534 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 785 820 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 719 748 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 752 781 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 606 637 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 538 567 IPR002110 GO:0005515
Lele10g0204 1617 SMART ANK_2a 461 490 IPR002110 GO:0005515
Lele10g0204 1617 Gene3D - 756 847 IPR036770 -
Lele10g0204 1617 PRINTS Ankyrin repeat signature 505 520 IPR002110 GO:0005515
Lele10g0204 1617 PRINTS Ankyrin repeat signature 768 782 IPR002110 GO:0005515
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat profile. 573 605 IPR002110 GO:0005515
Lele10g0204 1617 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 86 IPR013083 -
Lele10g0204 1617 ProSiteProfiles Protein kinase domain profile. 130 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0204 1617 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 1493 1611 IPR040847 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 1363 1484 IPR040847 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 860 978 IPR040847 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 984 1104 IPR040847 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 1110 1230 IPR040847 -
Lele10g0204 1617 Pfam Mind bomb SH3 repeat domain 1236 1357 IPR040847 -
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat profile. 719 751 IPR002110 GO:0005515
Lele10g0204 1617 SMART ring_2 6 51 IPR001841 -
Lele10g0204 1617 Pfam Ankyrin repeats (3 copies) 467 565 IPR002110 GO:0005515
Lele10g0204 1617 Pfam Ankyrin repeats (3 copies) 574 630 IPR002110 GO:0005515
Lele10g0204 1617 Pfam Ankyrin repeats (3 copies) 697 783 IPR002110 GO:0005515
Lele10g0204 1617 MobiDBLite consensus disorder prediction 84 116 - -
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat profile. 752 784 IPR002110 GO:0005515
Lele10g0204 1617 Gene3D - 422 634 IPR036770 -
Lele10g0204 1617 Pfam Protein kinase domain 161 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat profile. 504 537 IPR002110 GO:0005515
Lele10g0204 1617 Gene3D Transferase(Phosphotransferase) domain 1 183 421 - -
Lele10g0204 1617 SUPERFAMILY Ankyrin repeat 499 827 IPR036770 -
Lele10g0204 1617 Gene3D - 635 755 IPR036770 -
Lele10g0204 1617 SUPERFAMILY Protein kinase-like (PK-like) 130 418 IPR011009 -
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat region circular profile. 752 784 - -
Lele10g0204 1617 Pfam Zinc finger, C3HC4 type (RING finger) 6 51 IPR018957 GO:0046872
Lele10g0204 1617 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1616 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lele10g0204 1617 ProSiteProfiles Ankyrin repeat region circular profile. 719 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0204 Lele-ChrLele10 1317136 1325661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0204 138 422 MAP Kinase Kinase Kinase AT4G08470 27.425 2.12e-17 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele10g0204 Pkinase 1.3e-30 CL0016