Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0192 ATGTTCAAGAACACATTCCAGTCTGGATTTCTTTCCATTTTATACAGCCTTGGGAGTAAACCTCTACAGATATGGGATAAAGAAGTTGTCAATGGCCATATAAAACGACCTCAGGATGAAGACATACAGTCCAATGTACTTGAAATAGTGGGATCCAACATCCAATCCACATACATCACATGCCCTGCAGATCCAGCTGCAACACTTGGTATAAAACTTCCGTTCTTGGTTATGATTGTGAAGAATCTGAAGAAGTATTTTACATTTGAGATTCAAGTTCTGGATGATAAGAATGTGAGACGAAGATTTCGGGCTTCAAATTTCCAAGCTGTGACTCGAGTAAAGCCGTACATTTGCACCATGCCACTGAAAATGGATGATGGTTGGAATCAAATCCAGTTGAATCTGGTTGATTTGACCAAGAGAGCTTATGGCACTAACTACATGGAGACTCTGCGAGTTCAAGTCCATGCAAACTGCCGCCTGAGAAGGATATATTTCTCCGATCGCCTCTACTCTGAAGAGGAACTCCCACCAGAATTCAAATTGTACCTTCCAATGCAGCAGTTTGAGAAGGCACTTTTCATTTGGATCAAGATTCAAGCAGTAATGGGCTGTTGTGCTTATGGTTTGATCTATTTTAAAGATTTAATGGAGGAACCAAATCTGCCATCCAGCTTAGATATCTTAGAAAAATATTATGATCATGCAATTCATAACAAAACTGAACTCGATGAGAGGCTGTTCATTGATGAGGAGGACAGCTTGCTTGCTTCAGGAAGCTTGTCAGCAAGTTCTATGTCAACAAGTGGTGTCAAGAGGAACTTTGATATGATGGCTTCGCCTTCCAAGACAATTACTTGTCCAATTTCTCCCCACAGCTCTCCTGCATCTCATGCTAATGGGATTCTGGGTAGCCCAAATTCAAAGAAGGCAGCCATCCCGGTAAGCATTGCAATGACTACTGCAAAGTGGCTTCGTACTGTCATTTGTCCACTTCCATCAAAGCCCTCACCAGATCTGGAGAGATTTCTTACATCATGTGAGAGGGATGTTACAAGTGATGTATTGTACAGAGCACAAATTATATTGCAGGCTATATTTCCAAGTAGTCCTCTGGGAGAACGATCTGTAGCTGGCAGTCTCCAAAGTGCAAACGTCATGAATAGTGTCTGGGCTGAACGGCGGAGACTAGAAGCTCTTAAGTTATATTATAGGGTTTTGGAAGCAATTTGTAGGGCAGAAGCCCAAATATTGCACGCAACTAATTTAACGCCATTATTGACTAATGAGAGATTCCATAGATGTATGCTTGCATGTTCTGCGGAATTAGTCCTGGCAACACATAAGACTGTAACAATGTTATTTCCAGCAGTATTGGAGAGAACAGGGATAACGGCTTTTGATCTTAGCAAGGTGATAGAAAGTTTTATTAAACATGAGGAATCTCTCCCAAGAGAATTGAAACGACATCTGAATTCATTGGAAGAACAACTTTTGGAGAGCATGGTTTGGGAAAAGGGTTCCTCGATGTATAATTCTTTGACAGTTGCTAGACCTGCCCTTGCTGATGAAATTAATCGTCTTGGATTGTTAGCTGAGCCAATGCCATCATTAGATGCAATTGCAATGGAAATTAACTTCACTTGGGGAGGTTTTTCTCCTGTGCCTTCTTTGCAGAAGCTTGAGACTTCACCAAATCAGAATGGGGATACCAGGTCCACAAAAAAACTCTGCACAGAGAATCGAATTATTGTGGCAGAACAAAATTTCTTTACATCACCTATGAAGGATCATCCTCTGCATATCAACAACCTTAAGCCAAAGGTATCTCCACCTCCATTGCTGTCAGCATTTGCGAGTTCAACAAAACCAATTCCAGGTGGGGGAGGGGAAACATGTGCTGAAACTGGTATTAGTATATTTTTTGGCAAGATCATTAAGCTAGCAGCTGTCAGAATAAGTGCCATGGTTGATAGACTACAATTATCTTGGCAGATACAGGAGAGTGTTTTCTGTCTCTTTCAAAAAATCCTAAATCAACAACCATCTCTCTTTTTCAGACGCCATATCGACCAAATAATTCTCTGCTGTTTCTATGGAGTTGCAAAGAGAACAAGACAGGAGTATGCTAATATCATGAAATTTTACAATGAAATATTCATTCCCACTGTAAAGCCTCTGTTGGTTGAGCTTGATCCTGGGGTTAAAAATAAGGGGAACGGGATCCCTGAATTCAAGACTAACAGCGATGGTCATTTAGTTCAAAGTCCTGGATCTCCTAAAGTATCTTCATTTCCAAGCCTTCCTGATATGTCTCCAAAAAAGGTGTCTTCCAGACACAATGTCTATGTCTCACCATTACGATCGTCCAAGATGGATGAACTAATATCACATAGCTCAAAAAGCTACTACGCCTGTGTTGGGGAAAGCACTCATGCATATCAGAGCCCTTCAAAAGACCTGACTGCAATTAATAATCGTTTGAATGGCTCGTGGAAGGTCAGGGGCACCCTAAACTTTGATGCCAATGTCGGCTTGGTTAGTGATGCTGTGGTTGCAAACAGCCTCTATCTTTGGAATGGCTGTAATCCTTCCTCTTCATTTGCACCGTTGAAGTCTGAAACAGCCTGA 2634 0.4134 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVNGHIKRPQDEDIQSNVLEIVGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLKMDDGWNQIQLNLVDLTKRAYGTNYMETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQQFEKALFIWIKIQAVMGCCAYGLIYFKDLMEEPNLPSSLDILEKYYDHAIHNKTELDERLFIDEEDSLLASGSLSASSMSTSGVKRNFDMMASPSKTITCPISPHSSPASHANGILGSPNSKKAAIPVSIAMTTAKWLRTVICPLPSKPSPDLERFLTSCERDVTSDVLYRAQIILQAIFPSSPLGERSVAGSLQSANVMNSVWAERRRLEALKLYYRVLEAICRAEAQILHATNLTPLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIKHEESLPRELKRHLNSLEEQLLESMVWEKGSSMYNSLTVARPALADEINRLGLLAEPMPSLDAIAMEINFTWGGFSPVPSLQKLETSPNQNGDTRSTKKLCTENRIIVAEQNFFTSPMKDHPLHINNLKPKVSPPPLLSAFASSTKPIPGGGGETCAETGISIFFGKIIKLAAVRISAMVDRLQLSWQIQESVFCLFQKILNQQPSLFFRRHIDQIILCCFYGVAKRTRQEYANIMKFYNEIFIPTVKPLLVELDPGVKNKGNGIPEFKTNSDGHLVQSPGSPKVSSFPSLPDMSPKKVSSRHNVYVSPLRSSKMDELISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGSWKVRGTLNFDANVGLVSDAVVANSLYLWNGCNPSSSFAPLKSETA 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0192 877 Gene3D - 588 711 - -
Lele10g0192 877 Pfam Retinoblastoma-associated protein A domain 315 515 IPR002720 GO:0005634|GO:0051726
Lele10g0192 877 Gene3D - 317 505 - -
Lele10g0192 877 SUPERFAMILY Cyclin-like 637 735 IPR036915 -
Lele10g0192 877 Pfam CFA20 domain 1 184 IPR007714 -
Lele10g0192 877 Pfam Retinoblastoma-associated protein B domain 639 718 IPR002719 GO:0005634|GO:0051726
Lele10g0192 877 FunFam Retinoblastoma-related protein 1 317 505 - -
Lele10g0192 877 SUPERFAMILY Cyclin-like 322 517 IPR036915 -
Lele10g0192 877 SMART RB_A_2 314 515 IPR002720 GO:0005634|GO:0051726
Lele10g0192 877 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 205 707 IPR028309 GO:0006357|GO:0051726
Lele10g0192 877 MobiDBLite consensus disorder prediction 750 767 - -
Lele10g0192 877 MobiDBLite consensus disorder prediction 749 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0192 Lele-ChrLele10 1243322 1250163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0192 210 875 Core Cell Cycle Gene Families AT3G12280 64.395 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Lele10g0192 RB_A 1e-63 CL0065