Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0172 ATGTCCTTAGAGCAGCCTCAGAGGGTAGTGGTGATCCGGGATGCTTCAAGAGATGTGTGTACAAGGGCAATAAAAAAGGTTCTGAAACAGCTTTCTCTAAAACCCGGAGATGACCTCACAATTCTTGCTATATTTGGGAACAAAATCGTCAAGATGGATTCAAATTCAAGATCATTTATTGCAACAGATCAGGAAATTCTTCAAGAGGAACTTGGCAAGATTAAGGAAGAATGTTATAAGAGACCAAAAGTCATGAAACTTTCTGAGTATTGTGAAGCGAAAAATATAGAAGTGCTGGCGTACCCTTCTCGAGAGGTTACTTGTAATGCTGTCATGAATATATTAAGGGCAACATGCTTGATAATTGACAGACATATGAACAAAGATAAGAGGCACTTCATGGACAATCTTGCTTGTGGTATTTATAGGATAAGGAATCGCTATAGCATTCAAATGCTAAAAAAGCCAAAACCAACAGAGAACAGCAAATCATTTGCTGAAAGATCAGAGGAACAATTTTCTCATAACAGAACTAGATCATCATCAAGTGAGCATCTCATGGAAACCGGATTTTCGAGTCTTTCAAAGACTAATCACCAAACGTTAGGGAAACATTCGGTACTTCACATTTCTGAGAGCAAAGAGATAGGCCAAACAGAAGTACCTCAATTTGAGATGAAAGAAGAGCTCACAAACCCACTTTGTTCGGTGTGCAAGAACAAAAGACCGAAATCCGGGTGGATGAGAGACTTCAGTTACTCTGAGCTTTACACAGCCACGAAGGGATTTTCCCAGAAGAATTTTCTATCAGAAGAACACTCGCGAGCTCCACTTAGATGGGAAGATAGGATTAAAGTAGCCCTTGGATCTGCTAAAGGCTTACTATATTTGCATGAGAATAACATCATACACAGAGATGTGAGAACAAACAATATCCTCTTAACACATGATCATCAACCACTGCTGGGAGACTTTGGTTTGGCGAGAAGTCAACATGAAGACTCGATCCGGTCAACAGAGCTAATAACTGGAATGAGGATTACAGACCAAAGCCTTGAAGGCAAAAGTCTTGTCGGATGGGCAAGACCACTATTAAGAGAGAGGAATTATCCAGATCTAATTGATGAAAGGATAATGAATTCACATGATTATCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTCTATGCAGGGATCCTTACAAGAGATTAAACATGGGTGCAGTGGTTGATGTTTTAAGTCAGATAGCGGAGGGAAAGATATGTGGGAACATAAAAAGAGATTACTTGGCTGTGAGGTCAGATTCATCATACAGCACATCAGAGGAAGAAGGTGAAGAATCATCGGAAGATGAAATAATGAATGATGCAGAAGAAGATGAACCAGAAAGTACCAGTACTTATTCCAGCAGCAGCAACATGATGCAGATGGATTTAGGACTCCCTAACCCTCCTCCATCCCCTCCTCTAATCAATGCCACTTCCTTTAGCAGGCATCACCAATCAACTATGGACACCAAATACCGTGAATTCTGTGTTCCTCAAGATCAAGCAGAAATGAATCAAACAAGTATACCAGAACAAGGAATCAAAGGATGTGGGGAGACAAGAGAGGAGTTCAAGAACAATATTTGTGGTGGGTGCAAGGACAAGAGGTCAAGAACAGGAGGAAAGGGAGGGTATGGTAAAGTGTACAAAGGGGAGCTTCATGGGATGAAGATTGCTGTCAAGCAACACAGAAATGATACTGGAAGCAACATGCAAACAGGGGACAAGGAGTTCAACTCCGAGGTTGATGCACTCGGCAGACTGATTACTGGCAGGAAAACTACTGACAGAAGAAGACTTGCGGAAAGAAGAAGCCTTGTGGAATTGGTGGTGGAAGCGTTGAGTCACATTGCAGAAGGATGCGGATGCAATGATAAGGTGAAAAAGTGTGGATACTCATACCACACAGATGCATCATCCCTTTTCATCTCTGCCTCTTCTATAACTCAAACTCAAGGTTGA 2016 0.4132 MSLEQPQRVVVIRDASRDVCTRAIKKVLKQLSLKPGDDLTILAIFGNKIVKMDSNSRSFIATDQEILQEELGKIKEECYKRPKVMKLSEYCEAKNIEVLAYPSREVTCNAVMNILRATCLIIDRHMNKDKRHFMDNLACGIYRIRNRYSIQMLKKPKPTENSKSFAERSEEQFSHNRTRSSSSEHLMETGFSSLSKTNHQTLGKHSVLHISESKEIGQTEVPQFEMKEELTNPLCSVCKNKRPKSGWMRDFSYSELYTATKGFSQKNFLSEEHSRAPLRWEDRIKVALGSAKGLLYLHENNIIHRDVRTNNILLTHDHQPLLGDFGLARSQHEDSIRSTELITGMRITDQSLEGKSLVGWARPLLRERNYPDLIDERIMNSHDYHQLFWMVRIAEKCLCRDPYKRLNMGAVVDVLSQIAEGKICGNIKRDYLAVRSDSSYSTSEEEGEESSEDEIMNDAEEDEPESTSTYSSSSNMMQMDLGLPNPPPSPPLINATSFSRHHQSTMDTKYREFCVPQDQAEMNQTSIPEQGIKGCGETREEFKNNICGGCKDKRSRTGGKGGYGKVYKGELHGMKIAVKQHRNDTGSNMQTGDKEFNSEVDALGRLITGRKTTDRRRLAERRSLVELVVEALSHIAEGCGCNDKVKKCGYSYHTDASSLFISASSITQTQG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0172 671 PANTHER OS01G0253100 PROTEIN 278 334 IPR045271 -
Lele10g0172 671 ProSiteProfiles Protein kinase domain profile. 180 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0172 671 Gene3D Phosphorylase Kinase; domain 1 537 608 - -
Lele10g0172 671 SMART tyrkin_6 39 415 IPR020635 GO:0004713|GO:0006468
Lele10g0172 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 302 314 IPR008266 GO:0004672|GO:0006468
Lele10g0172 671 MobiDBLite consensus disorder prediction 443 465 - -
Lele10g0172 671 MobiDBLite consensus disorder prediction 466 480 - -
Lele10g0172 671 Pfam Protein tyrosine and serine/threonine kinase 266 337 IPR001245 GO:0004672|GO:0006468
Lele10g0172 671 SUPERFAMILY Protein kinase-like (PK-like) 559 606 IPR011009 -
Lele10g0172 671 SUPERFAMILY Protein kinase-like (PK-like) 268 417 IPR011009 -
Lele10g0172 671 MobiDBLite consensus disorder prediction 160 182 - -
Lele10g0172 671 MobiDBLite consensus disorder prediction 153 188 - -
Lele10g0172 671 Gene3D Transferase(Phosphotransferase) domain 1 264 339 - -
Lele10g0172 671 Gene3D Transferase(Phosphotransferase) domain 1 340 431 - -
Lele10g0172 671 MobiDBLite consensus disorder prediction 435 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0172 Lele-ChrLele10 1128667 1137248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0172 273 429 Trihelix Transcription Factor Family AT5G38560 32.039 1.04e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele10g0172 PK_Tyr_Ser-Thr 4.5e-14 CL0016