Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0171 ATGAATAAAATCCAGAGACTGAAGGTGGTGGTGATCTTCCCAGCTTTCTCTCCCCTACTTCCTCTCTTCATTCGCCATTTCTCTTTCTCATTTCTCCAATTCTCACATTCTCACATCCACTCTCACTATCTGCAAATTCTTCGTCTTTCCTCTCTCTCCCCTCTCTGCTTGTCTCCATTTGTCACTCTCCTTGTGAGTGTTGCTTTGGATCTTCGTGTTCTGTCTCTATTCGCTCGGATCTTCTTCCAGAAGCTACGGTTAGGATCTCAATTTCAATCCACATCACATAATTCCGACATTTTCCCTTTTCGTCTATGGTTTTTAGTTTCACTTTCAGCTTTTTGTGTGGTTGTGAAGTTTTTGGCAGATTACATAATACTAGTACAAGGGATGAGTCGAATGATACATGACATTGAAGATGGGGAGCTCCCCAGTGATCAGAATGGGCCACAGTTGAATGATGAGGGTAATGGAGGAAGTGCAAGTGGAGGTAATCTGAAGAAAGGTCCATGGACATCTGCTGAAGATGCTATTTTGGTGGACTATGTTAAGAAGCATGGGGAAGGGAACTGGAATGCTGTTCAGAAGCACTCAGGTCTGTCCCGATGTGGCAAAAGCTGCCGACTGCGGTGGGCAAATCACCTTAGGCCAAATTTAAAGAAAGGAGCTTTTACTGCAGAAGAAGAGCAGTTGATTGCTGAACTCCATGCCAAAATGGGAAACAAATGGGCACGCATGGCTGCACATCTGCCTGGTCGTACTGATAATGAGATAAAGAACTACTGGAATACTCGTATAAAGAGGCGTCAGCGGGCTGGTTTGCCTCTATATCCTCCTGAAGTGTGTTTACAAGAATCAAAAGAGAGTCAACAAGGCCGAAGCACTGCTGGAAAAACTGGAGATAGAGGAAATAACGATTTTCTTCAGGAAAACAGTTATCAGAAACATGATACTCTATTTGACAGTCTGAATGCAAATCAGGGAGGCTTGCCTTATGTGCCAGAGATTCCTAACATTTGTGCTAATAACATTTTGCTGAAAGGTCTTGGTTCTTCCCAGCATTGTAATTTTTTGCCTTCAACATTACCTTACCATAAGCGCTTTCATGATTCAACAATGCCATTTCTTAGTTCATCTGATGTGACCAGAAATGGGTTTTATCCTTTACACCATATTCAGGATTATACTTATGATAAGATTGCACAATCATTTGGATACCATTCTCCCCTTGATCCTGGTCCCTCCTCACAGAACTCACTGTGTTACAGCCATTCACTTTCAAATGGCGATTCCTCCTCTACTTCTAAGCCAACTTTTGAGGCTTTGAAGCTGGAGCTCCCTTCACTCCAATATCCAGAAACTGATTTAGGCAGCTGGGGTACATCTCCTCCGCCTCCTTTACTAGAATCAGTTGATGTTCTCACAGGTACTCCCCTGCCAACTAGTTTACTGGAGTCAGATTCTTCTTCACCATATAACAGTGGCCTCCTAGATGCTTTACTTCATCAGTCCAAGAATCTGAGCAGTTCAAAGAACCATTGTTCTGATAAGAGTTCAAATTCATCTACTGCTACCCCTGGTGTTAGAGCCAACAGTTCCACTTTGTATGTGTATGAGACAGAATGTGAAGACTATGCAGATTGTGTTTCTCCATTTGGTGCAACTTCAATATTTAATGAATGTCTTGCTGTTAGTGTCAACGGAAATTCATTTGATGAACTGCAACCTGCACAGACCTTAAATGAGAACACCCTGAAATCGGAATCTGCTTACAACGCTCTGACCCCCAACAGTGAAGATCAAGACATGTCAATGTTGGATATGCCCCGACCCGATGTTTTGCTTGCTTCAGATTGGTATGAGCAAGGCCCTGCATTTACCAAGAACCAGGCCGAGATGAACAATCCCATAGCAACCCTCATCGGTGGTGATGATTCAGCCACCGACTACAAGTACCTATCTGCGGAAATCTCATCACCTAGTCAATTATGGGGTTTGGATTCTTGCACTTGGAATTACATGCCTGCTGTTTGCCAAATGTCTGATCTTCCATAA 2055 0.4316 MNKIQRLKVVVIFPAFSPLLPLFIRHFSFSFLQFSHSHIHSHYLQILRLSSLSPLCLSPFVTLLVSVALDLRVLSLFARIFFQKLRLGSQFQSTSHNSDIFPFRLWFLVSLSAFCVVVKFLADYIILVQGMSRMIHDIEDGELPSDQNGPQLNDEGNGGSASGGNLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEEQLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQESKESQQGRSTAGKTGDRGNNDFLQENSYQKHDTLFDSLNANQGGLPYVPEIPNICANNILLKGLGSSQHCNFLPSTLPYHKRFHDSTMPFLSSSDVTRNGFYPLHHIQDYTYDKIAQSFGYHSPLDPGPSSQNSLCYSHSLSNGDSSSTSKPTFEALKLELPSLQYPETDLGSWGTSPPPPLLESVDVLTGTPLPTSLLESDSSSPYNSGLLDALLHQSKNLSSSKNHCSDKSSNSSTATPGVRANSSTLYVYETECEDYADCVSPFGATSIFNECLAVSVNGNSFDELQPAQTLNENTLKSESAYNALTPNSEDQDMSMLDMPRPDVLLASDWYEQGPAFTKNQAEMNNPIATLIGGDDSATDYKYLSAEISSPSQLWGLDSCTWNYMPAVCQMSDLP 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0171 684 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 215 IPR017930 -
Lele10g0171 684 ProSiteProfiles Myb-like domain profile. 163 215 IPR001005 -
Lele10g0171 684 SMART sant 167 217 IPR001005 -
Lele10g0171 684 SMART sant 220 268 IPR001005 -
Lele10g0171 684 MobiDBLite consensus disorder prediction 454 473 - -
Lele10g0171 684 FunFam Transcription factor GAMYB 223 269 - -
Lele10g0171 684 CDD SANT 223 264 IPR001005 -
Lele10g0171 684 Pfam Myb-like DNA-binding domain 168 215 IPR001005 -
Lele10g0171 684 Pfam Myb-like DNA-binding domain 221 264 IPR001005 -
Lele10g0171 684 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 270 IPR017930 -
Lele10g0171 684 Gene3D - 223 269 - -
Lele10g0171 684 SUPERFAMILY Homeodomain-like 165 262 IPR009057 -
Lele10g0171 684 FunFam MYB-related transcription factor 167 220 - -
Lele10g0171 684 MobiDBLite consensus disorder prediction 284 308 - -
Lele10g0171 684 Gene3D - 167 220 - -
Lele10g0171 684 CDD SANT 170 215 IPR001005 -
Lele10g0171 684 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 154 640 - -
Lele10g0171 684 MobiDBLite consensus disorder prediction 146 160 - -
Lele10g0171 684 MobiDBLite consensus disorder prediction 283 308 - -
Lele10g0171 684 MobiDBLite consensus disorder prediction 143 170 - -
Lele10g0171 684 ProSiteProfiles Myb-like domain profile. 216 266 IPR001005 -
Lele10g0171 684 MobiDBLite consensus disorder prediction 508 529 - -
Lele10g0171 684 MobiDBLite consensus disorder prediction 417 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0171 Lele-ChrLele10 1122898 1127832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0171 145 684 MYB Transcription Factor Family AT5G06100 41.410 6.98e-118 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0171 Myb_DNA-binding 6.7e-15 CL0123