Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0162 ATGATGACGTCCTTTCCGTCCAAAAACCTATGGATTCAACGGCAACAATGCCCATGTGGAGATTGGAAATGTTATGTGACACATGAGGGCGATGGTGAAGAGATTTCAGCTGGACCGGAATTAGTGAAGGCACGGAAAGCATCGTCAGAAGCTATGGTTTCCCCCTATGTAGGAATGGTGTTTAAGAGTGATGATGGTGCATTTGAATATTATGGGAATTTTGCCCGGAAGAATGGGTTCTCAATTAGAAAAGAAAGATCCAGACTTAGTCCGCAATTAGGCGTTTATAAACGCGACTTTGTTTGTTACCGTTCTGGGTTTGCCCCGATGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGAAAATCCGTACGTTGTGGATGTGATGCAAAAATGTATCTTTCAAAGGAGATTGTAGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTACGGCTTCTTCCAGCGTATCGTAAAATACAAGAGGCTGATCAAGAGCGCATACTCTTACTTTCTAAAGCCGGGTTTCCGATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCATTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAGCAGGAAGAAAGTTATTCAGGAAAATGATGCATTGCTAAGTGAGAAAAGAGAAAATGACGTATTGGAACTTCTTGAGTCATGCAAAACCATGAAAGAGACAGATGATGATTTTGTTTATGATTTTTCAGTGGATGGGAATGAAATGGTTGAGAATATAGCCTGGGCTTACGGTGACTCTGTTCGCGCATATTCTATGTTTGGTGACGTGGTTTATTTCGACACTACATATCGATCAATCACATACGGATTGGTCTTTGGTGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTATGGTTGTGTTCTATTGCAGGATGAAACGCTTCGGTCCTTCTCTTGGGCACTACAGAGTTTTGTTCGACTCATGAGAGGAAGATGTCCGCAAACAATTTTAACCAATATTGATCCTAGCCTTAGAGATGCCATAAGAAGCGAATTGCCAGGCACTAAACATGTAATCTCTAGATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTATTCCTCTTGGCTCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATCCAGAGGAATTTGAACTTCGATGGAACCAAATGACATCTGCCTTTGATCTTGGATCAGATAGGCATATAGAACTACTATACACATTGCAGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTCTGGCTCGGATGGCAACAGCAGCTTACTCAAAGTCATTAGACAGTTTTTTGAAAGGCATCTTTAGTGCGCAAACATGTTTACGGAGCTTTTTTGAGCAGGTTGGTATTTCTGCAAATGTTCTTCACCATGCTCGTCAAGAAACTCCACATATTCACCTCAAAAGTTGCATTCCTATCGAAGAACACGCCCGGAGTATATGCACACCGTTTGCTTTTAATGCCTTACAACAAGAATTATTGCTTACAATGCAATATGCTGTATCTGAAATGTCCAATGGATCATATATTGTACGCCACTTCAAAAGGATGGACGGCGAGCGTCTTGTGATATGGCTAGTTGAAGATGAACAAATCCATTGCTCTTGCAAGGAATTTGAATCCTCAGGGACCTTGTGCAGACATGCCCTTCGTGTATTCATAATGAAGGATTACTTTCAGCTCCCTGATAAGTACTATTTAAGTAGATGGCGACAACACGAGTCCTCTCTACTTCTTGATAATGATCATAATAGTAATCATCAAAGTATCGTGGATGAATGGTTTCAAGAATATCAGTCCCTTGCTGAAACTTTGTTTGCAGAATCTTCAATTACAAAGGAGCGATCCGACTTTGTTCATAGAGAACTGACAAAAGAAATTACTAGGATTCTTAGTGAGGTTAGAAATCTGCCTGAAAATGATGGAGTCACAATGGACTTGACTATTTCACCAAACATTTAG 2088 0.4028 MMTSFPSKNLWIQRQQCPCGDWKCYVTHEGDGEEISAGPELVKARKASSEAMVSPYVGMVFKSDDGAFEYYGNFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPMKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQSRKKVIQENDALLSEKRENDVLELLESCKTMKETDDDFVYDFSVDGNEMVENIAWAYGDSVRAYSMFGDVVYFDTTYRSITYGLVFGAWFGIDNYGRTIFYGCVLLQDETLRSFSWALQSFVRLMRGRCPQTILTNIDPSLRDAIRSELPGTKHVISRWCIMPKVPCWFSIPLGSRYEEFKSEFDALYHIENPEEFELRWNQMTSAFDLGSDRHIELLYTLQASWALSYVRGFFLARMATAAYSKSLDSFLKGIFSAQTCLRSFFEQVGISANVLHHARQETPHIHLKSCIPIEEHARSICTPFAFNALQQELLLTMQYAVSEMSNGSYIVRHFKRMDGERLVIWLVEDEQIHCSCKEFESSGTLCRHALRVFIMKDYFQLPDKYYLSRWRQHESSLLLDNDHNSNHQSIVDEWFQEYQSLAETLFAESSITKERSDFVHRELTKEITRILSEVRNLPENDGVTMDLTISPNI 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0162 695 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Lele10g0162 695 SMART 26again6 574 601 IPR006564 GO:0008270
Lele10g0162 695 Pfam SWIM zinc finger 569 598 IPR007527 GO:0008270
Lele10g0162 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 644 IPR031052 GO:0006355
Lele10g0162 695 Pfam MULE transposase domain 292 384 IPR018289 -
Lele10g0162 695 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0162 Lele-ChrLele10 1064441 1066693 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele10g0162 MULE 1.8e-14 CL0219