Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0158 ATGCACCACCACCGAATCCTCTTCGATAAATACCATCCTGGTTATTTCGGTAAGGTCGGTATGCGATACTTCCACAAGCTTCGCAACCAATTCTACTGGCCCATGGTCAACGTTGACAAACTCTGGCCACTCCTTCCCCAAGAAGTGAAGGATAAGGCTTCCAAGGATAACGCCCCGTTGATCGATGTCACTCAATTTGGGTACTTCAAGGTGTTGGGCAAAGGGGTTTTGCCCGAGAATAAGCCCGTCGTCGTGAAGGCCAAGCTCGTTTCCAAGATTGCTGAGAAGAAGATTAAGGAGGCTGGGGGAGCTGTTGTCCTCACTGCTTAA 330 0.497 MHHHRILFDKYHPGYFGKVGMRYFHKLRNQFYWPMVNVDKLWPLLPQEVKDKASKDNAPLIDVTQFGYFKVLGKGVLPENKPVVVKAKLVSKIAEKKIKEAGGAVVLTA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0158 109 ProSitePatterns Ribosomal protein L15 signature. 70 102 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lele10g0158 109 SUPERFAMILY Ribosomal proteins L15p and L18e 2 108 IPR036227 -
Lele10g0158 109 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 7 106 IPR021131 -
Lele10g0158 109 FunFam 60S ribosomal protein L27a 21 109 - -
Lele10g0158 109 Gene3D - 21 109 - -
Lele10g0158 109 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0158 Lele-ChrLele10 1040330 1040659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0158 1 109 Cytoplasmic Ribosomal Protein Gene Family AT1G23290 83.486 5.15e-65 191