Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0154 ATGAGCTTGTCGGCTGTTGTCCTGGTCGGCGTTGTTGTGGCGGCTGTCTTAGGAACAAATCTTGCTCACAACAGTGACAACGACAACAACACTAGTAGCAATAATGTTGATGTTTCGGCTTCGGTAAAAGCTATGTGTGATGTGACATTGTACAAGGATGCTTGTTATGGAAGCCTGGGACGTGCGGTTCAACAAGGACAGTGGATTAAGCCTGAGGATTTGTTCAGGGAGGGTTTTGGGGATTTGATTGGTGATGATAATAGAACCATGGAAGCTTTCAGTAATTGCCAGGAGCTCTTGGATCTTGCTATTGATCATCTCAATATCTCCTTGTCTTCTGGCCAGAATATTTCTTCTGTTCTTGATCTTTTTGAAGATCTTCAAACATGGTTGAGTGCTTCAGGTACTATTCTTAATTCCATCACTTCTGATATTGCTGAAACATACCAACAAACATGCATAGATGGCTTAGAGGAATCAAAAGAATCAGTAAAGAACAGAGTTAGAAGCTACCTAAAGAACTCTACAGAATTCAGCAGCAAGAGTCTCGCTATTATCACCTGGATTAAGCAAGCTACAAGCACGCTAAACTTGAGACGACGTCGCTTATTGACCCTACCGGCATGGCTTCATGAGAAAGACAGAAAGCTTCTTTCATCAGACAAGAACTTGAAGAAGAAAGCAGACATTGTTGTGGCAAAAGATGGTTCTGGAAAATACAGAACAATCTCTGAAGCACTCAAGCATGTCCCTGAAAAGAGCAAGAAGAGAACTGTGATCTATGTGAAGAAAGGAGTTTACTATGAGAATGTTAGAGTTGAGAAGAAAAAATGGAATGTCATGATGATTGGTGATGGAATGAACACAACAATCGTCTGCTTTTGGGAAGAACTTCATGGCGAGGGACATGGGATTTCGCAACACATGACAAGTGCTGATCAGTCTGTGTACTACATATGCTTCATTGATGCATTTCAGGACACTCTCTATGCTCATGCACATCTCCAGTTCTACAGAGAATGCAATATCTATGGCACTGTTGATTTCATCTTTCGAAACTCTGCAGTTGTCATTCAAACTCATTCTTAA 1089 0.4123 MSLSAVVLVGVVVAAVLGTNLAHNSDNDNNTSSNNVDVSASVKAMCDVTLYKDACYGSLGRAVQQGQWIKPEDLFREGFGDLIGDDNRTMEAFSNCQELLDLAIDHLNISLSSGQNISSVLDLFEDLQTWLSASGTILNSITSDIAETYQQTCIDGLEESKESVKNRVRSYLKNSTEFSSKSLAIITWIKQATSTLNLRRRRLLTLPAWLHEKDRKLLSSDKNLKKKADIVVAKDGSGKYRTISEALKHVPEKSKKRTVIYVKKGVYYENVRVEKKKWNVMMIGDGMNTTIVCFWEELHGEGHGISQHMTSADQSVYYICFIDAFQDTLYAHAHLQFYRECNIYGTVDFIFRNSAVVIQTHS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0154 362 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 189 IPR035513 -
Lele10g0154 362 SMART PMEI_2 37 185 IPR006501 GO:0004857
Lele10g0154 362 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 189 IPR035513 -
Lele10g0154 362 Pfam Pectinesterase 309 360 IPR000070 GO:0030599|GO:0042545
Lele10g0154 362 Pfam Pectinesterase 229 293 IPR000070 GO:0030599|GO:0042545
Lele10g0154 362 Pfam Plant invertase/pectin methylesterase inhibitor 42 185 IPR006501 GO:0004857
Lele10g0154 362 Coils Coil 154 174 - -
Lele10g0154 362 PANTHER PECTINESTERASE 309 360 - -
Lele10g0154 362 SUPERFAMILY Pectin lyase-like 227 359 IPR011050 -
Lele10g0154 362 Gene3D - 307 362 IPR012334 -
Lele10g0154 362 CDD PMEI-like_3 44 189 - -
Lele10g0154 362 Gene3D - 190 306 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0154 Lele-ChrLele10 1014509 1016350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0154 1 360 Carbohydrate Esterase AT3G10710 44.254 1.14e-97 299