Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0153 ATGAATAGTACCTATGTTGGGGCAGAAGAACACAATCACAGCACAAGGGAAGATAGACCCAAATATGAACACAGGGATTTCAATTCAGAATTGCAGAATCTCACCTTTTGGGAACTTGAGTTCTGTGCAAACATATCTTGGAAGGCCATGGGAAACTTAATTGATCCTAAGGGCTGGTTGCCATGGGTAGGAGACTCAGCACCAGACACCATTTTCTATGCTGAGTTCCAGAACTTTGGACCTGGTGCTTCGACAAAAGCTAGGGTCACATGGAAGGGTTTAAGAACAATTTCTGCTAAACAAGCAAATAGATTCACAGTTAAGGCCTTTCTTCAGGGAGACCGATGGATTCCAGCCACAAGCACACTTTACAAGTCTTCTCTCTGA 387 0.4367 MNSTYVGAEEHNHSTREDRPKYEHRDFNSELQNLTFWELEFCANISWKAMGNLIDPKGWLPWVGDSAPDTIFYAEFQNFGPGASTKARVTWKGLRTISAKQANRFTVKAFLQGDRWIPATSTLYKSSL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0153 128 MobiDBLite consensus disorder prediction 1 21 - -
Lele10g0153 128 PANTHER PECTINESTERASE 48 120 - -
Lele10g0153 128 SUPERFAMILY Pectin lyase-like 50 122 IPR011050 -
Lele10g0153 128 Pfam Pectinesterase 49 114 IPR000070 GO:0030599|GO:0042545
Lele10g0153 128 Gene3D - 43 128 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0153 Lele-ChrLele10 1013321 1014083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0153 54 128 Carbohydrate Esterase AT3G10710 69.333 2.53e-32 117