Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0152 ATGTGCCCATCCTCCAATCTTCCTCTTCTTTTCTTCTTCCTCTTTCTTCCATTACTCCTCCAAGCCCAACCTCCTCCACCGTCTCCTCCGCCGTCTCCTTCTGCTCTCTGCAAATTCACATTGTACCCTAAACTATGTCGTTCCATGCTCTCCGTCATCTCCTTCTCCCACTCCCCCTCCGACCCCTACAATGCCGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAAGAAGCTCCTCAAGGTCTTCGACGACTTCCTACGCAGCCGCCGCCATTCTCAATCCTCCCCGGAGGTTCGTGCCCTCGACGACTGCCGTGACCTCAGCCTCCTCAACCTTGAATACTTGGAAGCCGTCGCTGCCGACCTCCAAGCAGCCCCAACAGCCTCCGCTGAGCTCACAGACAAGGTCGAGAGCTACCTGAGCGCGTTGGCGACCAACCACTACACGTGCTACGACGGGCTTGTGGCGGCGAACAGTAACATTGGGAAAGTGCTGGCGGTGGCGTGGAAGAATGTGACGGAGGTGTATAGTGTATCGTTAGGATTGGTGAGTGAGGCTTTGAATCAGAATGTGAAGAACAAGTTCAAGACTCGCAAGCATGGACTTCCTTCTCAGTCTTACAAAGTCCGACAGCCTCTTGAGAAGCTCATTCAGGTTCTTCATCAGAAGTACAGTTGCAAGGCATCATCAAACTGCACAACCAGAAGTGAGAGGATTATTCACAGAGAAAGTGAAAGCAAAGGGATTCTATTAAACGGCTATTCAATAGTTAGCAATTATGGAACTGATAACTTCACCTCCATTGGAGAAGCCCTTGCTGCTGCACCTACAAACCTGAAACCAGAAGATGGCTACTTTCTTATCTATGTTAGAGAAGGATACTATGAAGAATATGTGATTGTTCCTAAACACAAGAAGAATATCTTGCTCATCGGCGATGGTATCAACCAGACGATCATCACAGGCAATCATAGTGGCATTGATGGTTGGACAACCTTCAATTCTTCCACCTTCGCTGTTTCTGGAGAAAGATTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGCGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCAGATCTCTCGACCTTTTATCGATGCAGCTTCGAAGGATACCAAGACACACTCTATGCTCACTCCCTGAGGCAATTCTACAGAGAATGTGAGATTTATGGCGCAGTAGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAGGCTGCAAGATGTATGCCAGGAAGCCACTTCCATTTCAGAAGAATGCCATCACAGCACAAGGCAGAACCGACCCGAACCAGAACACCGGAATCTCAATCCAGAATTGCACCATTGAAGCAGCACCGGATTTGGCTTCAGATTCGAACTCTACAACTACTACTGTCTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTGTACATGGAATCTTATATTGGGGATGTGATTCAACCTTCTGGTTGGTTAGAGTGGAATGGGACTGTAGGATTGGACACTTTGTTTTATGGTGAGTTCAATAATTATGGACCTAGGGCCAATACTAGCAATAGGGTTCAATGGCCTGGTTTTAATCTTCTGAATGCGACTCAGGCTTTGAACTTTACTGTCCTCAATTTTACACTGGGAGATACATGGCTTCCTGATACAGATATACCATACTCTGCAGGATTACTAGAACATTAG 1731 0.4743 MCPSSNLPLLFFFLFLPLLLQAQPPPPSPPPSPSALCKFTLYPKLCRSMLSVISFSHSPSDPYNAGKFSVKQSLKQAKKLLKVFDDFLRSRRHSQSSPEVRALDDCRDLSLLNLEYLEAVAADLQAAPTASAELTDKVESYLSALATNHYTCYDGLVAANSNIGKVLAVAWKNVTEVYSVSLGLVSEALNQNVKNKFKTRKHGLPSQSYKVRQPLEKLIQVLHQKYSCKASSNCTTRSERIIHRESESKGILLNGYSIVSNYGTDNFTSIGEALAAAPTNLKPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGINQTIITGNHSGIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPAKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGAVDFIFGNAAVVFQGCKMYARKPLPFQKNAITAQGRTDPNQNTGISIQNCTIEAAPDLASDSNSTTTTVLTYLGRPWKLYSRTVYMESYIGDVIQPSGWLEWNGTVGLDTLFYGEFNNYGPRANTSNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLEH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0152 576 SUPERFAMILY Pectin lyase-like 255 572 IPR011050 -
Lele10g0152 576 SMART PMEI_2 28 184 IPR006501 GO:0004857
Lele10g0152 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Lele10g0152 576 Pfam Pectinesterase 258 558 IPR000070 GO:0030599|GO:0042545
Lele10g0152 576 FunFam Pectinesterase 253 573 - -
Lele10g0152 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 188 IPR035513 -
Lele10g0152 576 Pfam Plant invertase/pectin methylesterase inhibitor 34 183 IPR006501 GO:0004857
Lele10g0152 576 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Lele10g0152 576 Gene3D - 256 575 IPR012334 -
Lele10g0152 576 CDD PMEI-like_3 35 187 - -
Lele10g0152 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 186 IPR035513 -
Lele10g0152 576 PANTHER PECTINESTERASE 23 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0152 Lele-ChrLele10 1008629 1012968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0152 37 574 Carbohydrate Esterase AT3G10720 58.303 0.0 658