Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0141 ATGAAGAGGTCTTGCAGTGCTTCTTCTTCTTCTTCGTCTTCTTCTCCCGAGTTTCTGAATCCTGATCAGACAGAAGCGCGAGGCAGAGCGAGTAATAAGCGAGCCAGAAGGAGTGGCAATGGAAATGGTAATGGTGATGGTAATAATGATGATAATGAGTCGAAGAAGGTGAAATCCGTGAGCTCGAGCTCTTCCGCCATTAATGGCGGACGAAGAAGTTCCGTTTACAGAGGAGTCACCAGGCATCGATGGACTGGGAGGTTTGAAGCTCACCTCTGGGATAAGAGTTGCTGGAACAATCTCCCGAACAAGAAGGGACGACAAGGGGCTTATGACAATGAAGAAGTTGCTGCTAGAACCTATGATCTTGCTGCTCTTAAATACTGGGGAAGAGATTCAACTTTAAATTTCCCGATAGAAATATATACCAAGGAGCTTGAGGAAATGGAGAAGGTCACAAGAGAAGAGTACTTAGCTTCATTGCGACGGCAAAGCAGTGGATTTTCTAGAGGGGTTTCTAAGTATCGAGGGGTAGCTAGGCATCACCATAACGGTCGATGGGAAGCTCGAATTGGAAGAGTACTAGATAACAAATATCTCTACTTGGGAACATATAGTACTCAAGAGGAAGCAGCTACAGCATACGACTTGGCAGCTATACAATACAGAGGCGCGAATGCAGTGACCAATTTTGACATTAGCAGATACATCGACAAGAGCAACCTCACCAACCAGAACAACAATGGCGAATCCCAAGAAGATCAAACTGTAATCACAATACCATCTCAAGTAGAAGAAGTAGGAGAAGAAGAAGAAGAAGCACCTCTTAATTCATCCTCCGAGTCCGAGTCCGAGTCGGAAAATCTGCAGATCCAGAAGCAATCACCACAACAACAACTACAAGACCTAGAAATCGAACCTGAAAATCCTCAAATTCAACCTAATCAGAACTCTCCACCGAACGACGAATCCTCCCCGATCGCTCCTGTGGACCCTACTAGTACGACCACCGATGAACAGGAGCTTCCATGGATATTCATGGATGACGACGGATTCTCTCAGTTTCAAGTTCCAGATCTGCCTGACGGCGACTTAGTGAGTGTGTTCGGTAATGGCGTAAGAAGATTCGACGACGAAATTGGATTTCTCTTCAGGCCAGATCCTAAGGAGGGCGATTTCAACCTGGACGGGATTTTGAGCAGTCCGAGCTGCTACGGAGATCTGGCGATGGCGGATTCAACGAGAATGGTGGCGGGTTATGATGATTGTGGTGGGCAAGAGAAGTTGCTCTGTTCTGCAAAATTTGCTTCTTGTTCACCAAACTCTTTGATTTCTTATTCGGAATCATTGGTGCGCTCTCTTGCTTGGTTCGACTCGACTCATCTCCACTCCTGGCTCCTAGGCAAATGA 1410 0.4631 MKRSCSASSSSSSSSPEFLNPDQTEARGRASNKRARRSGNGNGNGDGNNDDNESKKVKSVSSSSSAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNNLPNKKGRQGAYDNEEVAARTYDLAALKYWGRDSTLNFPIEIYTKELEEMEKVTREEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLDNKYLYLGTYSTQEEAATAYDLAAIQYRGANAVTNFDISRYIDKSNLTNQNNNGESQEDQTVITIPSQVEEVGEEEEEAPLNSSSESESESENLQIQKQSPQQQLQDLEIEPENPQIQPNQNSPPNDESSPIAPVDPTSTTTDEQELPWIFMDDDGFSQFQVPDLPDGDLVSVFGNGVRRFDDEIGFLFRPDPKEGDFNLDGILSSPSCYGDLAMADSTRMVAGYDDCGGQEKLLCSAKFASCSPNSLISYSESLVRSLAWFDSTHLHSWLLGK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0141 469 MobiDBLite consensus disorder prediction 279 338 - -
Lele10g0141 469 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Lele10g0141 469 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 SMART rav1_2 75 144 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 306 - -
Lele10g0141 469 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
Lele10g0141 469 FunFam AP2-like ethylene-responsive transcription factor 173 234 - -
Lele10g0141 469 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Lele10g0141 469 Gene3D AP2/ERF domain 75 141 IPR036955 GO:0003700|GO:0006355
Lele10g0141 469 MobiDBLite consensus disorder prediction 1 71 - -
Lele10g0141 469 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 MobiDBLite consensus disorder prediction 1 21 - -
Lele10g0141 469 Pfam AP2 domain 74 130 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 MobiDBLite consensus disorder prediction 264 338 - -
Lele10g0141 469 ProSiteProfiles AP2/ERF domain profile. 75 138 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 CDD AP2 74 139 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Lele10g0141 469 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0141 Lele-ChrLele10 932751 941737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0141 70 240 AP2-EREBP Transcription Factor Family AT5G57390 70.115 5.32e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele10g0141 AP2 1.6e-07 CL0081