Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0139 ATGTCAACAGTGAGAGATCCTGCTATAAAGCTATTTGGTAGAGATATTCCTGTAGATTCAACACGCAACACCGATTCGCCTCAAGTTATGAACAGGTATGATAAATCAACAAGTGAAGGCAATGTTCCTTTTAGAACTGGCAAGCAGCAGAATCCTATTGAAGAAGCAGATGGAAGCGTTTATGGAAGTCCTACTTTTGAAGTGGAGGCTAAAGTAGTTCATAGAACTAAGGACTACAAGGCTGGTAGTAGAGATATGGATCATCAAGAAAAAGTTTTCAAGAAACCAGATAAGGTGCTGCCTTGTCCTCGCTGCAACAGCTTGGAGACTAAGTTTTGCTATTTCAATAATTACAATGTTAATCAACCAAGGCATTTCTGCAAAAATTGCCAAAGATATTGGACAGCAGGGGGGATAATTAGAAATGTCCCCGTGGGGGCCGGAAAGCGCAAAAATAAACATTCTCCATTACCTGTTGGCCCAGATATAGCATCTTTTGCCCACACGGACTCCAACTCTATTCCTACTGTTTCAAGACCTACCGGAGGAATGGGAAATAGCCCTAGAGTTGGGGAAGAAGCTCCTCTTCGTGAATCCTTGGAAACTGTGTTAAATCTAAAAGGCCAGAAAAAAACTGAAGTTGACTCCTCTACTGGTGATGATAGTGAGGAACCTTCCAGGGATTTTGAATCCAGGGAAAATGAATGCTCAGCAAATGAAATTGAGCAGGTAGGTTTGCAACAGCACTTGAATGGTTTTAATCCTCTACATCCACTTCATTATTATCCTGTACCTCCCTGGGCTTACCAATGGAACCCATGTTGGAACTCAACGGTATTTAGACCCAGTCCTGCTTATATGGGATCTGCAACCATGATGGCAGTCCCAGGTTTCACTGCACCAACAATAGAATTATCGGCAGTACCTTTTTATTCGAGTCCCCTGCCAAGCTGGACTGGCCTGAAGGAGGAGTCTCCGTTTGCGGGGCCTACATTTAGTGGCATCCCATCACCTTCCTCTTCCACTAGCTGTAGTGATTGTTCTGGGACTAAGTCTCCAACCTTAGGAAAACATTCCAGAGATGTAAGTACTCAGGCAGGTGATGCAATGAGACAGAATCTTTGGGTACCTAAGACTCTGAGAATTAATGATCCAGAAGAAGCTGCAAAGAGTTCTATATGGTCTGCTTTTGGTACAAAGATTGAACAGAACAAACCGATTATCAAAGGCAGCGTTTTTAAATCTTTTGAACCTAAGTCGGAAGGTGCAAGTTCTCATATTTCAAATACTGATCAAATTCTGAGCGCAAACCCTGCTGCTTTTTCTCGCTCAGGATCATTTCAGGAAAGAATATAA 1356 0.4263 MSTVRDPAIKLFGRDIPVDSTRNTDSPQVMNRYDKSTSEGNVPFRTGKQQNPIEEADGSVYGSPTFEVEAKVVHRTKDYKAGSRDMDHQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSPLPVGPDIASFAHTDSNSIPTVSRPTGGMGNSPRVGEEAPLRESLETVLNLKGQKKTEVDSSTGDDSEEPSRDFESRENECSANEIEQVGLQQHLNGFNPLHPLHYYPVPPWAYQWNPCWNSTVFRPSPAYMGSATMMAVPGFTAPTIELSAVPFYSSPLPSWTGLKEESPFAGPTFSGIPSPSSSTSCSDCSGTKSPTLGKHSRDVSTQAGDAMRQNLWVPKTLRINDPEEAAKSSIWSAFGTKIEQNKPIIKGSVFKSFEPKSEGASSHISNTDQILSANPAAFSRSGSFQERI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0139 451 MobiDBLite consensus disorder prediction 166 183 - -
Lele10g0139 451 MobiDBLite consensus disorder prediction 146 237 - -
Lele10g0139 451 PANTHER CYCLIC DOF FACTOR 2 4 450 IPR045174 GO:0003700|GO:0006355
Lele10g0139 451 MobiDBLite consensus disorder prediction 213 237 - -
Lele10g0139 451 ProSiteProfiles Zinc finger Dof-type profile. 100 154 IPR003851 GO:0003677|GO:0006355
Lele10g0139 451 ProSitePatterns Zinc finger Dof-type signature. 102 138 IPR003851 GO:0003677|GO:0006355
Lele10g0139 451 MobiDBLite consensus disorder prediction 421 451 - -
Lele10g0139 451 MobiDBLite consensus disorder prediction 418 451 - -
Lele10g0139 451 MobiDBLite consensus disorder prediction 332 361 - -
Lele10g0139 451 Pfam Dof domain, zinc finger 97 154 IPR003851 GO:0003677|GO:0006355
Lele10g0139 451 MobiDBLite consensus disorder prediction 329 361 - -
Lele10g0139 451 MobiDBLite consensus disorder prediction 19 48 - -
Lele10g0139 451 MobiDBLite consensus disorder prediction 17 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0139 Lele-ChrLele10 919620 922049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0139 4 449 C2C2-Dof Transcription Factor Family AT5G39660 33.204 1.27e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele10g0139 zf-Dof 1e-31 No_clan