Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0125 ATGAAATTTGGACGGCGAGCGCTATCGGGCACACCAAATCTCTCTGCAAGTGTTCAGTGGCCTTGTTTCGTTGTTGCATTTGCTAGAGCACTGGCTCCTTTAGTAGAAACAGCAATTGAAAAGGGAAATTTAGCAGAAATGTTGGATCCTAGGGCAGGGAATTGGCCACTTCAGGAGACTTTGGAGTTAGCTCGATTAGGACTAAGCTGCACAGAACTTCGGCGTAGAGACCGGCCTGATTTGAAAGATCATGTTCTTCCCATGCTGGAGAGATTAAAAGAAGTTGCTGATAGGGCTCAACAACATTCTGCTGCAATTGTTACTGTTAAATCTAAACCTCCTAATCACTTTATCTGCCCAATACTTCAGAATGTGATGGAGAATCCTTGTATTGCTGCCGATGGTTATACTTATGATTACAAAGCAATTGAAACATGGATGCAAACCAATGACTAA 456 0.4276 MKFGRRALSGTPNLSASVQWPCFVVAFARALAPLVETAIEKGNLAEMLDPRAGNWPLQETLELARLGLSCTELRRRDRPDLKDHVLPMLERLKEVADRAQQHSAAIVTVKSKPPNHFICPILQNVMENPCIAADGYTYDYKAIETWMQTND 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0125 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 151 IPR013083 -
Lele10g0125 151 PANTHER OS02G0152300 PROTEIN 30 150 - -
Lele10g0125 151 SUPERFAMILY RING/U-box 112 150 - -
Lele10g0125 151 ProSiteProfiles U-box domain profile. 112 151 IPR003613 GO:0004842|GO:0016567
Lele10g0125 151 Pfam U-box domain 114 149 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0125 Lele-ChrLele10 835091 837137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0125 28 150 U-box Gene Family AT5G51270 55.556 1.19e-43 150