Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0122 ATGGCAACTTGGCGTCCAAGTTGCTTCAAGTTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTCGTACCTTACCTCTTCAGTGTCCGTTCTAGTTTTGTGAGGCCTGTTAATCTCCGTTGTTTCTATAAGCGTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGTGGTCCTCTACTAGTTACGTCGTGCAGCAATTTTGAGTCTGTAGAACTGCAAGAAGCTCAGAATGCTGTTTCAAAACTTCTTCAAGAATTCGGGGTGTCTGAGGAGAAATCTAATTCTATTGCGTCTAATTCACCAAAGTATTTGAGGATGCTGGTTGATGAAGTTAGGGAAAAGGACGAACTTTCAATGTGGGAGGAGCAGATTGATGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGGAGAAAGGTGATAATGGCAAAGTTGCATACTTGGAGAGTCTCGGCTTGAGCCTCTCTTCAGCTATGAATGTGGCCAGATATCTGTCTGTAGAAACACTTGCAACACTCATTCTTAAGGTTAAGTGTATGAAGGAATTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCAGTGAGAAGAGTTCGCAATATGATGATGCAGATATCAATTCATATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTAAACATGTTGAATTCCAGTGATGCTGCTTTTGATGTTTTAATTGAATCATTTCCCCGTCTACTGTTGTTATCAGGAAAGTTTCACATGCAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCTCATCAGAAATATACTGTTGACTTTTCCTCCCTTTTTGCTGTGGGATATTGAAGTATTTAAAACTCGAGTGCTAGCCTTGAAAGAGATTGGTGGTGTAAAGGACAATTATGCCAAGTTACTGCTAAAGTATCCATGGATACTATCTAAAAGCATTCAAGACAATTATCAGGAGGTCCTCTCTTTGTTTGATTCAGAGAAGGTTCCCAAGGCATTCGTTGATCGCGCAATCAAAAGCTGGCCCCATATACTGGGTTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAAATAGGAGTTCAATACAAGAAGTTGGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTACAGAAGCCGCAAGACTTTCTCCAGGTCGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGACAATACTGGCTCGTTGTCCTGAAATCTTTGCTGCTTGCCCTACCAAGACTCTCAAGAGAAAGATTGAGTTCCTACATGGTATTGGTGTTTCTGAAATTCACCTTCCTCGGGTTATAAAAAAGTATCCAGAACTTCTTGTGTCCGACCCAGACAGAACTATGCTACCTAGGTTGATGTACTTGATGAAGTTAGGACTATCCGAAAGAGACGTTGCATTCATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGTAGAATTCCTGGTGAACACAATGGAGAGGCCAGTGAGGGACGTGGTGGGATACCCCAGGTATTTTAGCTATTCTTTAGAGAACAAGATAAAGCCAAGATTTTGGGTTCTCAAGGGAAGGAATATTGAGTGTAGTTTGAAGGATATGCTGGCAAAAAATGATGAAGAATTTGCTTCTGAATATATGAATATCCCGTCATCAACTCATTCTTGA 1743 0.4148 MATWRPSCFKFTPSSFLPHSSLVPYLFSVRSSFVRPVNLRCFYKRQRLWLRSSRRCGPLLVTSCSNFESVELQEAQNAVSKLLQEFGVSEEKSNSIASNSPKYLRMLVDEVREKDELSMWEEQIDGFQEKVVHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSVETLATLILKVKCMKELFFSGSESYEFPVRRVRNMMMQISIHIDEDLQQTLSFFEKVEARRGGLNMLNSSDAAFDVLIESFPRLLLLSGKFHMQPLVEFLESVGIQRGLIRNILLTFPPFLLWDIEVFKTRVLALKEIGGVKDNYAKLLLKYPWILSKSIQDNYQEVLSLFDSEKVPKAFVDRAIKSWPHILGCSSSKLKLMVDQFGEIGVQYKKLGQVIAKSPQLLLQKPQDFLQVVLFFENMGFDRQTIGTILARCPEIFAACPTKTLKRKIEFLHGIGVSEIHLPRVIKKYPELLVSDPDRTMLPRLMYLMKLGLSERDVAFMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPVRDVVGYPRYFSYSLENKIKPRFWVLKGRNIECSLKDMLAKNDEEFASEYMNIPSSTHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0122 580 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 Gene3D Transcription termination factor 3, mitochondrial 361 579 IPR038538 -
Lele10g0122 580 PANTHER CGI-12 PROTEIN-RELATED 475 575 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 Coils Coil 72 92 - -
Lele10g0122 580 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
Lele10g0122 580 Pfam mTERF 75 296 IPR003690 GO:0003690|GO:0006355
Lele10g0122 580 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0122 Lele-ChrLele10 824044 828086 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele10g0122 mTERF 3.9e-97 No_clan