Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0120 ATGCTATACCTTGCCTGTCGCTACTACGTCGCTCTTCTTGCCGTCAGTCGTCACCTCTTCTTCTTTCATAACCGTCGACGCTTTCGTCATCTTTCTTGCCGTCACCATGCCGCGGCGGAGAAGTTTGCACGAGCAATATCGATGAAACTGAGAGAGTCAGAAATATTTGCAGAAGAGGAAGATGGAGAGAGAGAGTTTGGTGGAGGAGGAACACACATAAAGAAGGGACCATGGAGTGCTGAAGAAGATGAGATTCTCATGAAACATGTCAAGAAAAACGGTCCAAGGGATTGGAGCTCCATTCGATCCAAAGGCTTGCTTCCCCGCACGGGGAAATCATGCCGGCTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCAGGGGAAGAAAGAGTGGTGATAGAATTGCAGGCAGAGTTTGGGAACAAGTGGGCGAAAATAGCGACGTACTTGGAAGGAAGAACAGATAACGATGTGAAGAATTTCTGGAGCAGTCGGAGAAAGAGGTTGGAAAGAATGTTGCAGAAACCTTCTCCATCATCATCATCATCATCATCAAAGCCACACAATAAGAACAAAGCAACAATATCTCATAAAATTCATCACCCACCACCACCTGTAGTTGAAGAGGTTCCTGCTTCATGCAGTTCAAATCATATAGAGCAAAACCCATCAGGCGACAACAAGTTTCAGATGGTTGATGACAGTGAGGAGTTGAAGGTGATGAATAATGTGAAAGCTGAGGAGGCTACTCCACTTCACATGGTTCCATCATTTGAGTCTTCATCAGAGTACACCTTTTCTCAAGTTCTTCTTCCTGATGAGTCCCACCAAGTGGACTATGGCGGCCTCTTGCCGCCGCCGGTCTACCATGGCCTGGTCGATCCGGAGCCTTTCGATGCCACCTTGCTCGAAGTTTTTGAGCAGCACAAGAAGCCAGGTCTTACAATGGGAGGGATTTCTCAGAGTTCAATTCCAGCAAATGGCTTCTTTGAGGACTTCCCAAGTGACATACTTGACTACTTTGAAGACCTTCCTAACTCGTTAGACAAATGA 1077 0.467 MLYLACRYYVALLAVSRHLFFFHNRRRFRHLSCRHHAAAEKFARAISMKLRESEIFAEEEDGEREFGGGGTHIKKGPWSAEEDEILMKHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAGEERVVIELQAEFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSSSSSSKPHNKNKATISHKIHHPPPPVVEEVPASCSSNHIEQNPSGDNKFQMVDDSEELKVMNNVKAEEATPLHMVPSFESSSEYTFSQVLLPDESHQVDYGGLLPPPVYHGLVDPEPFDATLLEVFEQHKKPGLTMGGISQSSIPANGFFEDFPSDILDYFEDLPNSLDK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0120 358 MobiDBLite consensus disorder prediction 177 235 - -
Lele10g0120 358 FunFam MYB transcription factor 75 127 - -
Lele10g0120 358 CDD SANT 131 170 IPR001005 -
Lele10g0120 358 ProSiteProfiles Myb-like domain profile. 70 122 IPR001005 -
Lele10g0120 358 FunFam Transcription factor GAMYB 130 203 - -
Lele10g0120 358 PANTHER TRANSCRIPTION FACTOR DUO1 69 355 - -
Lele10g0120 358 Gene3D - 70 128 - -
Lele10g0120 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 178 IPR017930 -
Lele10g0120 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 126 IPR017930 -
Lele10g0120 358 Pfam Myb-like DNA-binding domain 131 171 IPR001005 -
Lele10g0120 358 ProSiteProfiles Myb-like domain profile. 131 174 IPR001005 -
Lele10g0120 358 SUPERFAMILY Homeodomain-like 73 170 IPR009057 -
Lele10g0120 358 MobiDBLite consensus disorder prediction 182 198 - -
Lele10g0120 358 CDD SANT 77 122 IPR001005 -
Lele10g0120 358 Pfam Myb-like DNA-binding domain 78 128 - -
Lele10g0120 358 SMART sant 128 176 IPR001005 -
Lele10g0120 358 SMART sant 74 124 IPR001005 -
Lele10g0120 358 Gene3D - 130 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0120 Lele-ChrLele10 817077 821322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0120 64 181 MYB Transcription Factor Family AT3G60460 79.661 1.42e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0120 Myb_DNA-bind_6 7.9e-12 CL0123