Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0103 ATGGCGCTTAAAACTCTCTCCACTGTCCTCCCTTCTCTCTCTATCTCTATCCCACACCACTTCTCACCCTTCAACCTTAAATTGTCCCAATTGGATACAAAGCCTTCCCTTATAATCTGCAAATTTTCCAAGTCACAGACACAAGCTTCCCGGAAACCGCCATCCTCAGATGCGCATTTCACAGACTATGGACCGGTGAAACCCGAAGGAACCGGCGCAGCAGCTCCCACACCCGGTGAGAGGCACCTTGAACATCAGAAGTCCGTTGAGGCGCTGAAGCTCGTCCTCAAAGAGAACAAGAAGGAGCGGAAGAAGCAAAAAAGAGGGAAGCTTTTGATGAAAGCTTCTTTGGCTGTTGCTTGTTGTTATGGGTGTGGAGCTCCTTTGCAAGCTTCGGAGATTGATGCCCCTGGTTACGTGGATTTGAAGACTTATGAATTGAAGAAGAAACATCACCAGCTTAAAACCATTCTATGTGGGCGATGCCGACTTTTGTCTCATGGGCAGATGATAACTGCTGTTGGTGGACATGGAGGATACTCCGGTGGTAAACAATTTATTACGGCTGAAGAGCTTCGAGAAAAATTGTCTCATTTACGCCATGAGAAAGCTTTAATTGTGAAATTGGTTGATATTGTTGACTTCAATGGCAGCTTTTTGTCTCGTGTGCGTGATCTTGCCGGTGCCAATCCAATAATACTGGTGGTGACGAAGATTGATCTCCTTCCGAGAGATACTGATCTCAACTGTATTGGGGATTGGGTTGTAGAAGCTGTCACCAAAAAAGGGCTAAATGTTCTCAGTGTTCATCTCACCAGTTCTAAATCATTAGTTGGAATAACAGGAGTGGTATCAGAAATTCAGAAAGAAAAGAAGGGACGAGATGTGTACATTCTGGGGTCAGCTAATGTTGGGAAATCTGCATTCATTAACGCTTTACTGAAAATAATGGCAGAAAAAGATCCAGTTGCTGCAGCTGCACAGAAGTACAAACCGATACAATCTGCTGTCCCTGGAACTACCTTAGGCCCAATTAAAATTAACGCCTTTCTAGGAGAGGGGAATCTATATGACACTCCAGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTTTCCTGTCTTGCTCCTCGAAGCCGACTGAGGGGTCTATCTTTCCCTAATTCTCAGGTATTCAAAGACAACGTTGTCGCAGATCATTCCAAATCAAATGGCTTAAATGGATTTTCAATATTTTGGGGAGGGCTGGTCAGAATTGATGTCTTGAAGGCTCTACCAGAAACATGCTTGACATTTTACGGGCCCAAGGCCTTACAGATTCATATTGTACCCACAGAGAATGCGGATGATTTTTACCAGAAAGAAGTTGGAGTTCTGCTGACCCCACCAACCGAAAGAGTAAAGGCTGAGAATTGGAGAGGACTTGAATCAGAACGTAATTTGCAAATAAAATTTGAAGATGCGGAAAGGCCCTCTTGTGATGTAGCTATATCAGGTCTGGGATGGTTTACTGTTGAACCAGTTGGGAGATCACACAGAATCTCAGAAACAGTATCTGCAGAAACTCGTGGGGAATTGCATTTAGCATTGCATGTTCCCAAGCCTGTTGAGATTTTTGTGAGACCACCATTACCAGTTGGCAAGTTTGGAGCAGAGTGGTATCAATATAGGGAATTAACAGAAAAGGAAGAGGAAACCAGACCAAAATGTAACATCATGGCTTTCACTTCTCGTTTCCAAGACTCTCTTACCAGAACTGCACTTCGAGCCTACCTTGCTGAGTTCATCTCCACTTTCTTCTATGTCTTCGCCGTGATCGGCTCCGCCATGTCTTCCAGGAAGTTGATGAAGGGTGAAGCAGCGAAGACGGAGGTGGCGAGTCTGGTGGCGGCGGCCATAGCCAATAGCTTTGCGTTGTCGTCGGTGGTGTTCATGGCGTGGGACGTGTCAGGAGGACATGTGAACCCTGCAGTGACCTTCGCGAGGGTAGTTGGAGGCCATATCAACCTCTCAACTGCGTTCTTCTATTGGATCTCCCAGATGATTGCTTCTGTTTTTGCCTGCCTTCTTCTCAAGATCACCTTCGTCGGAATGCACGTGCCAAGTTACACAATAGCACCACAAATGACAGGGTTTGGGGCATCAATAGTGGAAGGTGTCCTTACATTTGCATTAGTGTACACCGTGTATGCTGCTAGGGACCCCAGGCGTAGTGGTCAACTGGGGTCCACAGGTGCCCTAGCCATCGGCCTGATCGCGGGAGCCAACGTCCTAGCCGCTGGTCCCTTCTCCGGCGGGTCGATGAACCCGGCTTGCGCCTTCGGCTCAGCCACCATTGCCGGAACCTTCAAGAACCAAGCAGTATATTGGGTTGGACCCCTCATTGGTGCTGCCGTTGCTGCTCTTGTTTATGACACTGCAGGCTATCCTTCTCAGAATGCTGATTCATTTGTAGAAGCTGATAGGGTTTGA 2487 0.4688 MALKTLSTVLPSLSISIPHHFSPFNLKLSQLDTKPSLIICKFSKSQTQASRKPPSSDAHFTDYGPVKPEGTGAAAPTPGERHLEHQKSVEALKLVLKENKKERKKQKRGKLLMKASLAVACCYGCGAPLQASEIDAPGYVDLKTYELKKKHHQLKTILCGRCRLLSHGQMITAVGGHGGYSGGKQFITAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGANPIILVVTKIDLLPRDTDLNCIGDWVVEAVTKKGLNVLSVHLTSSKSLVGITGVVSEIQKEKKGRDVYILGSANVGKSAFINALLKIMAEKDPVAAAAQKYKPIQSAVPGTTLGPIKINAFLGEGNLYDTPGVHLHHRQTAVVHSEDLSCLAPRSRLRGLSFPNSQVFKDNVVADHSKSNGLNGFSIFWGGLVRIDVLKALPETCLTFYGPKALQIHIVPTENADDFYQKEVGVLLTPPTERVKAENWRGLESERNLQIKFEDAERPSCDVAISGLGWFTVEPVGRSHRISETVSAETRGELHLALHVPKPVEIFVRPPLPVGKFGAEWYQYRELTEKEEETRPKCNIMAFTSRFQDSLTRTALRAYLAEFISTFFYVFAVIGSAMSSRKLMKGEAAKTEVASLVAAAIANSFALSSVVFMAWDVSGGHVNPAVTFARVVGGHINLSTAFFYWISQMIASVFACLLLKITFVGMHVPSYTIAPQMTGFGASIVEGVLTFALVYTVYAARDPRRSGQLGSTGALAIGLIAGANVLAAGPFSGGSMNPACAFGSATIAGTFKNQAVYWVGPLIGAAVAALVYDTAGYPSQNADSFVEADRV 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0103 828 Pfam Major intrinsic protein 591 809 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 Gene3D Glycerol uptake facilitator protein. 578 824 IPR023271 -
Lele10g0103 828 CDD YqeH 159 362 - -
Lele10g0103 828 Pfam 50S ribosome-binding GTPase 296 366 IPR006073 GO:0005525
Lele10g0103 828 CDD MIP 594 810 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 FunFam Probable aquaporin TIP5-1 578 821 - -
Lele10g0103 828 PRINTS Major intrinsic protein family signature 722 740 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 PRINTS Major intrinsic protein family signature 640 664 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 PRINTS Major intrinsic protein family signature 755 777 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 PRINTS Major intrinsic protein family signature 677 696 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 PRINTS Major intrinsic protein family signature 594 613 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 PRINTS Major intrinsic protein family signature 792 812 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele10g0103 828 Gene3D - 190 366 IPR027417 -
Lele10g0103 828 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 189 365 IPR030378 GO:0005525
Lele10g0103 828 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 3 575 IPR044229 GO:0003924
Lele10g0103 828 MobiDBLite consensus disorder prediction 48 83 - -
Lele10g0103 828 SUPERFAMILY Aquaporin-like 588 815 IPR023271 -
Lele10g0103 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 366 IPR027417 -
Lele10g0103 828 ProSitePatterns MIP family signature. 658 666 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0103 Lele-ChrLele10 735586 743036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0103 579 827 Major Intrinsic Protein MIP AT3G47440 62.249 5.77e-97 301