Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0082 ATGAAGTTCGAGTTGTGGGGATTTGTGGACGAAGCTCTTCAATTATTTTGTAGAAAAGCTTTCAGATGTGATTTTCCTGTAAGAGGTTATGATGAGGGGCTAATAAATAGGGCACTCGAATATGCGAGTGGCCTTCCATTAGCAATAGTAAAACTGGGCTCGTTCTTATATAATACAAGACCCTCTGAATGGAGCACAGCACTGGTTGAATTCAAAAGGGTAGCTAGCTTTATGGTGATGAAGGTCCTCAAGAGAAGTTTTCGTGAACTGGACGTAATTGTAAGGGAAACGTTTCTAGACATTGCATGCTTTTTCATAGGCAAGGAGAGTAAATTTGTAGAAGGAATTCTGGATAGTGCTCATACATTTTCTTATGATGGAGACCTTGGAGTGAAGCACAATATGCAACTTTTGATTGAGAAATCACTCATGGCCGTTATAGATCAAAAAATACAAATGCATGGTTTACTGCGAGAAACGGGAAGGGAAATTGTTCGTCATGAATCCCCTTCTAAGTCAGAAGAGAGGAGTAGATTATGGGATTTTGATGATATTCATGGTGTTATGCAAAATGACACGGTAAGTTGGTTTCAAGGTGCTTCGGCTTTCACTGAAACAGTCATGGAGAGTGCCTTTGCAAGTGCTTCTGCAATCACAGACCAGAGGCAAAAAATAGAGCAGTATAAACAAATTCTTTCTGCTGTTATTGCATCAAATGACATCATTCAGGCAATGAGATTTATAGATCACATGTTGTCTGATGTTGTTCCATTAGTAGTATCACGGCAACTTTTGCAGACCTTTGCCCAAGAATTGGGAAGATTGCAGCCAGAAACACAGAAAGAGATTGCCCATTACGCTCTTGCTCAGATTCAGCCTCGTGTTGTGTCATTTGAAGAGCAGGTTTTAATTATTAGAGAGAAACTTGCGGAGTTATATGAATCTGAGCAGGAATGGTCAAAGGCAGCTCAGATGCTCAGTGGCATTGATCTTGATTCTGGAATGAGGTTGATTGATGATACATTCAGGCTGTCTAAGTGCGTCCAAATTGCTCGTTTATATCTTGAGGATGACGATGCTGTCAATGCTGAAGCGTTTATTAATAAAGCATCATTCTTGGTTAGCAATAGTCAGCAAGAAGCACTGAATTTACAGTACAAGGTTTGTTATGCAAGGATTTTAGATTTAAAGAGGAAGTTCTTGGAAGCAGCCTTACGATATTATGATATATCTCAAATTGAAAAGCGGCAAATAGGAGATGAAGTGATAGATGAAGATGCACTTGAACAAGCTTTATCTGCTGCTGTTACATGTACAATTTTGGCAGCTGCAGGACCTCAACGTTCTCGTGTTCTTGCTACATTGTATAAGGATGAACGTTGCTCAAAACTGAAAATTTATCCAATACTGCAAAAGGTGTACTTGGAGAGAATTCTGAGAAAGCCCGAAATTGATGCGTTTGCAGAAGAATTGAAAGCGCACCAGAAAGCCCTTCTTCCAGACAATTTTACTGTGCTGGACCGTGCAATGATTGAGCATAATCTACTGAGTGCAAGCAAACTTTACACAAATATTAGCTTTGATGAATTAGGAACACTGTTGGGAATTCCACCACACAAGGCTGAGAAGATAGCATCAAGAATGATTTACGAGGATCGGATGAGGGGATCTATTGATCAGGTTGAAGCTGTCATTCATTTTGAGGATGACACTGAAGAGTTACAACGATGGGACCTGCAGATTGTAGGCCTATGTCAATCACTCAATGATGTTTTGGATAGCATGGCCAAGAAAGGCTTTCCAGTTCCTGTTTGA 1815 0.4011 MKFELWGFVDEALQLFCRKAFRCDFPVRGYDEGLINRALEYASGLPLAIVKLGSFLYNTRPSEWSTALVEFKRVASFMVMKVLKRSFRELDVIVRETFLDIACFFIGKESKFVEGILDSAHTFSYDGDLGVKHNMQLLIEKSLMAVIDQKIQMHGLLRETGREIVRHESPSKSEERSRLWDFDDIHGVMQNDTVSWFQGASAFTETVMESAFASASAITDQRQKIEQYKQILSAVIASNDIIQAMRFIDHMLSDVVPLVVSRQLLQTFAQELGRLQPETQKEIAHYALAQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAQMLSGIDLDSGMRLIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQQEALNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEVIDEDALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQRWDLQIVGLCQSLNDVLDSMAKKGFPVPV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0082 604 FunFam COP9 signalosome complex subunit 4 496 576 - -
Lele10g0082 604 ProSiteProfiles PCI domain profile. 399 572 IPR000717 -
Lele10g0082 604 SUPERFAMILY "Winged helix" DNA-binding domain 499 573 IPR036390 -
Lele10g0082 604 SUPERFAMILY "Winged helix" DNA-binding domain 79 189 IPR036390 -
Lele10g0082 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 101 IPR027417 -
Lele10g0082 604 Gene3D - 9 91 IPR042197 -
Lele10g0082 604 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 203 598 IPR040134 -
Lele10g0082 604 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 501 584 - -
Lele10g0082 604 SMART PINT_4 501 584 IPR000717 -
Lele10g0082 604 Gene3D - 498 575 IPR036388 -
Lele10g0082 604 Pfam PCI domain 475 568 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0082 Lele-ChrLele10 581631 589805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0082 3 181 WRKY Transcription Factor Family AT5G45050 30.939 1.68e-18 88.2