Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0080 ATGGACCTGAAGTCAAATCATACTCCTGTTCTTACTGAAGCTGCACCCATAACAAAATCGAGATTGGGTGTGCATTCCAGTCTGTTGCCTTATTCTCCTACAGGGGCAGCTTTTCCACCTGGCCTGCTTCTGACAAGCCCTAGGAAGAAGACAGGAATTCTTGATGATGTTCGTTCTAGTGGTTGGCTGGATGCCATGATATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATGTTAATCATGGTTTCACATCATCTGATGCTGATAGTGCTTACAGTACCTGGCTGCTAAAGTATCCGTCAGCACTTGCGTCTTTTCAGAAAATTGCAAACTATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGAATGTGCTTTCATGTCTGACAGTATGCGCGCTGCTGTGAAAAAAGTGGCAGAGCTCTTTCCCACGGCAATAATTAGTGGACGAAGCCGTGACAAGGTATATGAATTTGTAGGACTAACTGAACTCTATTATGCTGGTAGCCATGGGATGGACATCATTGGTCCTGTCAGACAATCTGTATCTGATGACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCTGCTGCTGAAATCTTGCCCATGATTGATGAGGTGTTTTGTTCCCTTATTGAATGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAGCAATAAATTTTGTGTCTCTGTACACTATCGCAACGTAGAGGAGAAGAATTGGAAAATAGTGGGGCAAAGAGTCCTTGATATTCTGAAGGACTATCCACGTTTGCGATTAACCCATGGGCGCAAGGTTTTAGAGGTTCGACCAGTGATCGATTGGGATAAGGGGAAGGCCGTCACATTTTTACTCGAGTCACTTGGGCTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGGACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGAAATAAAGGTTATGGCATCCTAGTTGCTTCTGCACCCAAGGAAAGCAATGCCGTCTACTCTCTTCGTGATCCATCAGAGGTGATGGAATTTCTCAAGTCTCTTGTGGTTTGGAAGTCAGGCCTCCTTAAAAGAAGTATTCCTGTTTCCTGGAGGTTTCTTGGAGCAGATTTCAGCAAAGAAGCCTCTCATGGAAAGCATAGTCTCATCTACCTAGTTGGCTCATCTTTACCCTCTGCTCTCTTATGTGCCCCTCTCTTTATGGACACCAATAAGCATGCCCAAGTGCGCAATCCCTTGCTGGATGCGCCGACACACACTGAGAAGACTTGTCGACGGCGACGGGTCGTGGTGACGATCTTGTGCTCCATCATTCTGCTGGTATCGGTAGTTGCATTGGTGAGAAACCAGAGGGAGGAGCCATTGTCGGAGGAGAAGGAAGAAACTACGTCGTTTCCGAGAGGAGTGTATGAAGGAGTATCAGCCAAGTCGAATCCGGCATTGGAAGTTGCAGAGAAGCTTTCGTATAATTGGACGAATGCTATGTTCTCTTGGCAAAGAACTGCTTACCATTTTCAACCTCAAAAGAATTGGATGAACGGTCCATTGTATCACATTGGGTGGTACCATCTATTCTATCAATACAACCCTGATTCGGCAGCATGGGGCAACATCACATGGGGTCATGCTGTATCAAGGGACCTGATTCATTGGCTCTACCTTCCCATTGCCATGGTTCCCGATAGGCCGTTCGATATAAACGGTGTATGGACCGGGTCAGCCACATTGTTGCCAGATGGCAAAATCATAATTCTCTACACTGGTGACACCGAAAAAAGTGTACAGGTACAAAATCTCGCTTACCCCGCCAACCTATCCGATCCTCTTCTCCTAGATTGGGTCAAATATGACCATAATCCAGTTTTGGTGCCTCCAACCAACATTGGCCCAAAAGATTTTCGCGACCCGTCCACAGCATGGATCGGGCTCGATGGGAAATGGCGAGTAACCATTGGGTCAAAAATAAATAAGACAGGCTTTTCATTGGTTTATACTACCACAGATTTCATCCACTATGAGAAAAATGTTCACCACTTGCATTCAGTACCGGGCACGGGTATGTGGGAGTGCGTGGACTTCTACCCGGTTTTGATAAATGGTTCGAAAGGCTTGCCCACATCAGTAAATGGCCCAGGAGTTAAGCACTTGTTAAAGGCTAGCATTGACGATACTAAAGTGGATCATTATGCACTTGGGACTTACTTCATTGAGAATGATACATGGGTACCCGACAACCCAAAAGAGGATGTGGGCATCGGGTTAAGAGTGGACTATGGAAGATACTACGCATCAAAGTCATTTTATGACCCAGTCAAAGAGAGACGTGTTCTTTGGGGTTGGATTAATGAAACAGATACAGAAAATGATAACTTGAAAAAGGGTTGGGCATCTGTTCAGACTATTCCAAGGGCAGTGACATTTGACAAGAAAACTGGAACTAATATTCTTCAATGGCCAGTAGAGGAGATAGAGAGCTTAAGGCTAAGAAGTTCTGAATTTGAAGGCATCGTCCTCAAGCCTGGCTCTGTTTTGCCCTTGAACATAGGCTCCGCCACACAGCTGGATATATTTGCTGAATTTGAAATTGAACCGTTGGATTCCCAAGAGACTGACGAAGACAGTGTAGGCTGTGGGGGTGGAGCTATTGATAGAAGTGCTTTGGGACCATTTGGCCTCCTGACTATAGCTGATGATACACTTTCTGAGTTGACACCCATTTATTTCCGTCTCTCTAATACAAGCCATCAGAATTCAACTACTTTTTTCTGCGCTGATGAAACTAGGTCATCTAAGGCTCCTGAAGTTTCAAAGGCAGTTTATGGGACCCAAGTTCCGGTGCTCCGTGATGAGAAACCGTCGATGAGAGTATTGGTTGACCATTCAATAATTGAGAGCTTTGGTCAAGGAGGGAGAAGAGTGATCACATCTCGGGTTTATCCAACAGAAGCAATATATGGAGCAGCAAGGTTGTTTCTATTCAACAATGCAACGGCCATCACCATCAAGGCCTCCCTCAAGATTTGGGAAATGAACTCTGCTTTCATACGCCCTTTTCCCTTTGATCAGAGCCAATGA 3156 0.4465 MDLKSNHTPVLTEAAPITKSRLGVHSSLLPYSPTGAAFPPGLLLTSPRKKTGILDDVRSSGWLDAMISSSPTAKKITKDVNHGFTSSDADSAYSTWLLKYPSALASFQKIANYAKGKRIALFLDYDGTLSPIVDNPECAFMSDSMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSVSDDHPNCIRSTDNQGKEVNLFQPAAEILPMIDEVFCSLIECTKDIKGAKVESNKFCVSVHYRNVEEKNWKIVGQRVLDILKDYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNKGYGILVASAPKESNAVYSLRDPSEVMEFLKSLVVWKSGLLKRSIPVSWRFLGADFSKEASHGKHSLIYLVGSSLPSALLCAPLFMDTNKHAQVRNPLLDAPTHTEKTCRRRRVVVTILCSIILLVSVVALVRNQREEPLSEEKEETTSFPRGVYEGVSAKSNPALEVAEKLSYNWTNAMFSWQRTAYHFQPQKNWMNGPLYHIGWYHLFYQYNPDSAAWGNITWGHAVSRDLIHWLYLPIAMVPDRPFDINGVWTGSATLLPDGKIIILYTGDTEKSVQVQNLAYPANLSDPLLLDWVKYDHNPVLVPPTNIGPKDFRDPSTAWIGLDGKWRVTIGSKINKTGFSLVYTTTDFIHYEKNVHHLHSVPGTGMWECVDFYPVLINGSKGLPTSVNGPGVKHLLKASIDDTKVDHYALGTYFIENDTWVPDNPKEDVGIGLRVDYGRYYASKSFYDPVKERRVLWGWINETDTENDNLKKGWASVQTIPRAVTFDKKTGTNILQWPVEEIESLRLRSSEFEGIVLKPGSVLPLNIGSATQLDIFAEFEIEPLDSQETDEDSVGCGGGAIDRSALGPFGLLTIADDTLSELTPIYFRLSNTSHQNSTTFFCADETRSSKAPEVSKAVYGTQVPVLRDEKPSMRVLVDHSIIESFGQGGRRVITSRVYPTEAIYGAARLFLFNNATAITIKASLKIWEMNSAFIRPFPFDQSQ 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0080 1051 Gene3D - 119 210 IPR023214 -
Lele10g0080 1051 Gene3D - 231 384 IPR023214 -
Lele10g0080 1051 Gene3D Glycosyl hydrolase domain; family 43 535 857 IPR023296 -
Lele10g0080 1051 CDD GH32_Fruct1-like 537 833 - -
Lele10g0080 1051 SUPERFAMILY Concanavalin A-like lectins/glucanases 846 1041 IPR013320 -
Lele10g0080 1051 CDD HAD_TPP 120 370 - -
Lele10g0080 1051 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 473 1040 - -
Lele10g0080 1051 SUPERFAMILY HAD-like 120 377 IPR036412 -
Lele10g0080 1051 SMART glyco_32 531 997 IPR001362 GO:0004553|GO:0005975
Lele10g0080 1051 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 858 1037 - -
Lele10g0080 1051 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 535 858 - -
Lele10g0080 1051 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Lele10g0080 1051 SUPERFAMILY Arabinanase/levansucrase/invertase 521 847 IPR023296 -
Lele10g0080 1051 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Lele10g0080 1051 Pfam Glycosyl hydrolases family 32 N-terminal domain 531 846 IPR013148 -
Lele10g0080 1051 Pfam Glycosyl hydrolases family 32 C terminal 849 1036 IPR013189 -
Lele10g0080 1051 Pfam Beta-fructofuranosidase, N-terminal domain 441 522 IPR021792 GO:0004564
Lele10g0080 1051 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 339 IPR006379 -
Lele10g0080 1051 Gene3D - 858 1037 - -
Lele10g0080 1051 TIGRFAM T6PP: trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Lele10g0080 1051 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0080 Lele-ChrLele10 551672 563598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0080 437 1045 Glycoside Hydrolase AT1G12240 57.008 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0080 10 551672 563598 Lele11g0069 11 1524278 1526852 hybridization
Lele10g0080 10 551672 563598 Lele12g1172 12 18802566 18804860 hybridization