Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0075 ATGTCTGCTCGCTCTCATGTGGGATTCAAAAAGAAAAAGGAGAATATGAATTCTTTTTCTTATGTTCCACCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTTGATTACTACCTGAGGAACAAGGTGACTTCAAGAAGGATTGACCTTAATGTCATCAAAGATGTCGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGGATAGGAACAGAAGAACAAAATGAGTGGTACTTTTTTAGTCATAAAGACAAGAAATATCCAACAGGGACTCGAACAAATAGAGCCACAGCTGCAGGATTCTGGAAAGCAACAGGAAGAGATAAGGCTATCTATTCCAAGCATGATCTCATAGGTATGAGGAAAACCCTAGTTTTCTACAAGGGTCGAGCCCCTAATGGACAGAAATCTGATTGGATTATGCATGAGTATCGCCTCGAAAACGATGAAAATGGCACCCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAATAACAACCATAAGGAAAGTGAGTGAGCATGACTCTCCTTGTTGGTATGATGACCAACAAGTCTCAACTTTTATGCAAGACTTGGACTCTCCAAAGCAACAAAATCCTCAACAACCTAATTTGATGTACCACCAAATCCCTATCATCAATAATAATTATCCTTGCAAGAAAGAGATGGATCATCCTCACAACATGCCTTTGCTTCGCCACCTTCAAACTCGCCACCACTTCCTCCCTCAGCTCCCGCTTCTCGATTACCAGAACCCAAAATTGCTTCAATCTCCGGTTGTAAACCCTACCAACAACAACAACAACTTAATGGCACCGTATGGTCTTGATGTGATGAACCATGATCAGCAAACTTTTCAGGCTGCTGTTTATGGCGGTAGTAGTAGCCAAGAACAAGTGGCGGCGGACGATGAACAAGTGACTGATTGGCGAGTACTCGACAAGTTTGTCGCTTCACAACTTAGTCAAGAAGATGTGCCTAATAATAACAAGGACCACAACAACAATAATAATGCAGCAGGCACAAGCAGCAGCAGCAACAATATTTTTCGGAGCGCCATGGAGAATATTGCTAGCAGTGTACAATTCAGAGCATCATCAAATCTGGAAAAGCAGCAAGAGATGGTTCCTGAAAATGCCTCAAGTTGCCCAATTGATTTGTGGAAATAG 1194 0.4213 MSARSHVGFKKKKENMNSFSYVPPGFRFHPTDEELVDYYLRNKVTSRRIDLNVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLENDENGTPQEEGWVVCRVFKKRITTIRKVSEHDSPCWYDDQQVSTFMQDLDSPKQQNPQQPNLMYHQIPIINNNYPCKKEMDHPHNMPLLRHLQTRHHFLPQLPLLDYQNPKLLQSPVVNPTNNNNNLMAPYGLDVMNHDQQTFQAAVYGGSSSQEQVAADDEQVTDWRVLDKFVASQLSQEDVPNNNKDHNNNNNAAGTSSSSNNIFRSAMENIASSVQFRASSNLEKQQEMVPENASSCPIDLWK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0075 397 MobiDBLite consensus disorder prediction 330 354 - -
Lele10g0075 397 Pfam No apical meristem (NAM) protein 23 150 IPR003441 GO:0003677|GO:0006355
Lele10g0075 397 ProSiteProfiles NAC domain profile. 22 171 IPR003441 GO:0003677|GO:0006355
Lele10g0075 397 MobiDBLite consensus disorder prediction 378 397 - -
Lele10g0075 397 SUPERFAMILY NAC domain 19 171 IPR036093 GO:0003677|GO:0006355
Lele10g0075 397 FunFam NAC domain-containing protein 31 175 - -
Lele10g0075 397 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 331 - -
Lele10g0075 397 Gene3D NAC domain 31 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0075 Lele-ChrLele10 523597 526245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0075 16 397 NAC Transcription Factor Family AT1G12260 51.378 1.56e-124 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g0075 NAM 4.8e-38 No_clan