Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0035 ATGATGAGAAGGAAGAAGAAGAAAAAGAAGAATAATGAAAAGAAGACGAAGATGAATCAGAAGATAAAGATGAGCACGGAAAAGAAAGTGAAGAGAGAGGACCACAAAGTCTCTTCTAATAAAGAGCTGTGCCTTCCTCAAGTACAGCCGCCATCAATCCGCATCCCAGGCTCGATCATTTTCTCACGCAGCTGGTTGGTAATGTCTCAAGAGAGTTCAGTTTCAGACCCTTCTTCGGCTTGCTGCTCAAGATCGGATCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTATACCGAGCCTTCATTTTCTCTGTGCCCATCTTCTTCACTTTCATCCTGCTCTTTCTGTTCTACGTGTTCTACCTTCGACCTCGTAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCGTTTGCGACTGCAGAGGATAATGACGGTAACTCCAGGCCTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATAGTATACAAAGAAAGCTTCTCAGTTAAAGATACGCACTGCTCAGTTTGCCTTTTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTGCATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGTCGCTTGTCCCTTCTAGCTTCTGCTAAATCTTCAACTGAGGCATCTTATTTACAGAGACCATCTGACGATGAAGAAACACCAACTGCGCAATTCTCTGAATCAAGATCTACAACGCATCCAGATAATAGTGTTGCCCAGAGTTGCTCTAGAGATGATGCAAGCAGTGCCCACTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCAGTTAG 864 0.4491 MMRRKKKKKKNNEKKTKMNQKIKMSTEKKVKREDHKVSSNKELCLPQVQPPSIRIPGSIIFSRSWLVMSQESSVSDPSSACCSRSDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFATAEDNDGNSRPELGLKKELREMLPIIVYKESFSVKDTHCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTEASYLQRPSDDEETPTAQFSESRSTTHPDNSVAQSCSRDDASSAHCIDVERGNAESS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0035 287 MobiDBLite consensus disorder prediction 1 35 - -
Lele10g0035 287 FunFam RING-H2 finger protein ATL7 143 224 - -
Lele10g0035 287 SMART ring_2 177 218 IPR001841 -
Lele10g0035 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 224 IPR013083 -
Lele10g0035 287 MobiDBLite consensus disorder prediction 232 273 - -
Lele10g0035 287 ProSiteProfiles Zinc finger RING-type profile. 177 219 IPR001841 -
Lele10g0035 287 MobiDBLite consensus disorder prediction 17 35 - -
Lele10g0035 287 MobiDBLite consensus disorder prediction 232 271 - -
Lele10g0035 287 PANTHER OS11G0150450 PROTEIN 109 261 - -
Lele10g0035 287 MobiDBLite consensus disorder prediction 1 16 - -
Lele10g0035 287 Pfam Ring finger domain 176 219 IPR001841 -
Lele10g0035 287 SUPERFAMILY RING/U-box 161 224 - -
Lele10g0035 287 CDD RING-H2_PA-TM-RING 176 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0035 Lele-ChrLele10 219570 224124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0035 90 286 C3H Transcription Factor Family AT4G10150 52.500 2.47e-65 202