Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0021 ATGTGTTCTTCGAATAACGGTGGGGTGCCGCCGGGTTTCCGGTTTCATCCGACAGATGAAGAGCTTCTTCATTATTACTTGAAGAAGAAGTTGAACTTTCAGAAGTTTGACATGGAGGTCATTAGAGAAGTGGACTTGAACAAGATTGAGCCTTGGGACTTGCAAGAGAGATGTAGAATAGGATCAACACCACAGAACGAGTGGTACTTCTTCAGCCACAAGGACAGGAAGTATCCAACGGGATCGAGGACGAACAGGGCGACCAACGCCGGCTTCTGGAAGGCGACGGGACGAGACAAGTGTATCAGAAACAGCTTCAAGAAGATCGGCATGAGGAAGACTCTCGTCTTTTACAGAGGCCGAGCTCCTCATGGCCAGAAAACTGACTGGATCATGCATGAATATCGCCTCGAAGATGCTGACGACACTCAAGCTAATCCCAATGAAGATGGGTGGGTGGTTTGCAGAGTGTTCAAGAAGAAGAACCTATTCAAGATTGGGAATGAAGGAAGCTCCATGCATAACGCAGACCAACAACTCAACAATTCCTCAAGCATCTATCAACCTCGTTCCTTCATGAACAGAGAAAGCCAATACTTACTTCATCATCATCAACAGCAACAAAACCCTAGAAACTCTTCTGGCTTCCAGCTCGAAAAACCTGAGCTTGCTCTTCATTATCCTCCTCCTGACTTGCAAAACCCTCAATACTCTCTCTTCCAGGCTCAACCCCTTCTTCCTCCTGCGGCTCACTACAGTTCATATACATCAGCCCTACCTTCAGACACACCTCCCATGGCCGCCAAACAACTCATGACGAACCCGGCCGTGGACGACTGCGATAGCGGCAGCGAGGGATTGAGGTACCAAGTTTCAGAGTCTGCAAATATGGAGGTTGGCACGTGTGAACCCACAGGTCATCATGAGATTGGAACAACAAGAGAAGATCAAGGGTTTAACGAATGGGGCGTGCTTGATAGGCTTGTGGTCACTTCTCATCATCTTGGAAATGAAGAATCATCCAAAGGGGTTAGGTTTGAGGATGCAAATAATAATCCTCAATCTGTTCATCAGATCAATCATCAGCAGCAACTTTCATTGCGTGGAGAAGTCGACTTTTGGGGCTATGGAAAACAATAA 1140 0.4702 MCSSNNGGVPPGFRFHPTDEELLHYYLKKKLNFQKFDMEVIREVDLNKIEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDADDTQANPNEDGWVVCRVFKKKNLFKIGNEGSSMHNADQQLNNSSSIYQPRSFMNRESQYLLHHHQQQQNPRNSSGFQLEKPELALHYPPPDLQNPQYSLFQAQPLLPPAAHYSSYTSALPSDTPPMAAKQLMTNPAVDDCDSGSEGLRYQVSESANMEVGTCEPTGHHEIGTTREDQGFNEWGVLDRLVVTSHHLGNEESSKGVRFEDANNNPQSVHQINHQQQLSLRGEVDFWGYGKQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0021 379 MobiDBLite consensus disorder prediction 338 363 - -
Lele10g0021 379 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Lele10g0021 379 FunFam NAC domain-containing protein 18 164 - -
Lele10g0021 379 SUPERFAMILY NAC domain 6 160 IPR036093 GO:0003677|GO:0006355
Lele10g0021 379 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lele10g0021 379 MobiDBLite consensus disorder prediction 346 363 - -
Lele10g0021 379 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Lele10g0021 379 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0021 Lele-ChrLele10 130704 133359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0021 3 375 NAC Transcription Factor Family AT1G33280 53.067 1.67e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g0021 NAM 1.2e-36 No_clan