Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0004 ATGAAAACCCTAACGCAAGCCTTGGCTAAGACAGCGGCGGTCATCGAGAAGAAGGTCCAGACCACCGTGCAGGAGGTGACCGGACCCAAGGCTCTCCAGGACTATGACCTCCTTGATCAGATCGCGTCCGCTGGGCCTGGTCTCGCATGGAGGCTTTACTCGGCTAGGCCCAAGGAGCCATCGCGCCAGCAGCAGTACCCCCTTGTTTGTGTTTGGGTACTGGACAAGCGGGTGCTGTCCGAGGCGCGAATGCGTTCTGGGCTGACCAAGGCAGCTGAAGATTCGTTTTTGGATTTGATTCGGGCCGATGCGGGTAAACTGGTGCGATTGAGGCATCCCGGGGTGGTGCATGTGGTGCAAGCGTTGGATGAGAGTAAGAATGCGATGGCAATGGTGACTGAGCCCTTGTTTGCATCGGTGGCTAATACTCTTGGGAATTTGGAGAATGTTGCCAATGTTCCTAAGGAGCTCAGGGGAATGGACATGGGATTGTTGGAAGTGAAGCATGGGTTACTTCAGGTAGCAGAATCCCTGGACTTCCTGCACAACCATGCCCAACTTATTCATCGAGCGATATCACCAGAGAATATTCTTATCACCTCAAGTGGAGCTTGGAAACTCGGTGGATTTAGTTTTGCAGTTTCAGCAGCTCAGGCCTCTGGTGACTCCACTGGTCTGCAAGCTTTCCATTATGCTGAATATGATGTTGAGGACTCTATTCTTCCACTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTTAAGAGCACTGTGTCTTCAGCTGGCTGGGCTTCTGATATTTTCAGTTTTGGTTGCGTTGCTTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCCGCAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGGCACATTCTCATCCATTCCCCCGGAGTTGGTTCCTGACTTGCAGAGGATGCTATCTTCGAATGAGTCTTCAAGACCAACTGCAATGGCTTTTACAGGCTCCCCTTTTTTTCGGAATGACACTAGGTTGCGTGCTCTTCGCTTCCTTGACCATATGCTTGAAAGAGATAACATGCAGAAGTCAGAATTCTTAAAAGCTTTGTCAGATATGTGGAAAGATTTTGACAGCCGTGTATTGCGGTACAAGGTCCTTCCACCTCTCTGTGCAGAACTTAGGAATGTGGTAATGCAGCCAATGATTCTTCCTATGGTTCTTACTATTGCAGAATCTCAGGATAAAAGTGATTTTGAGATCACAACTCTTCCAGCACTCGTTCCTGTCTTGAGTGCTGCTGCAGGTGAGACATTGTTGCTACTTGTGAAGCATGCAGAACTTTTAATAAACAAGACTAGTCAGGATCATTTAGTTTCACATGTTCTGCCTATGGTTGTTCGGGCTTTCGATGAAAATGATGCTCGTGTACAAGAAGAGGTTCTGAAGAAATCTATATCCCTTGCTAAGCAACTTGATACCCAGCTGGTCAAACAAGTGGTTTTGCCTCGTGTTCATGGCTTAGCGCTTAAAACAACGGTTGCTGCGGTTAGAGTCAATGCCTTGCTGTGCTTAGGAGATATGGTTAGCCGACTTGATAAATCTGCTGTCCTAGACATCTTGCAGACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCTACCCTTATGTGTACACTGGGGGTTGCAAATTCTATTTATAAGCGGTATGGAGTAGAGTTTGTTGCCGAGCATGTGCTTCCATTGGTTATACCCCTCCTGACAACTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTAAGGATGATAGAGGAGAAGCGAGGAGTGGTTCTGACGGAATCTGGAACCCCAGAGGTCGCCAAACCATTTCCTCCAATTAATGGTCTTCACAATGAAGCCACTACTAAAACAAACAGCGCTCTTGCTTCTTCAACCAAGAGCAGCTCTTCCTGGGATGAAGATTGGGGTAGCACTGCGAAAGGGACTTTCACTTCCCAAAGTTTTACTGACAAATCAAGTCAATCTGTGCCAGGAATCCCAATGGTTCAAATTACATCCTCACAGCAACATTCATCCTCATCTGCTGTGTCTAATCAGCAGGCAACCATGTCATGCCCCTCAGTGGATTTAGAGTGGCCTCCTCGTGCTTCTGCTGCCGGTAACCAATCTTTAGGTGATTCTGAAAGTCAAATGAAGACAACAGGAACCTCTTCTATGTCTAGTCTTGACCACATTGATCCTTTTGCTAATTGGCCTCCACGTCCTAGTGGCTCATTAGGTGTATCTGGAATTTCCAACAATGGTTCTTTAGCACCACCACTAAACAAAAATGGGCCTAGTTTAATGTCAAACTCCTCTAATGCGATGAATAATCAAACCAACAATAGTTGGTCTTTCAATCCCCCAAGTTCAGCAGATCCAGTTGGTTTGAACCTTGGTGATTCTAGTTCAACCACTGGTAGTCTGCATGGTGGTATAAATTCTCTGAATTCTCTTGCGTACTTAAAGCAGAGTCATGGATTTCCAGCATCCAATGTTCCCCGTGCAGAGAACAAGTCAACAGATCTTGGATCCATCTTTGCTTCTGATCAGAATGACCTGATTGCCCCTAAGCTTGCACCACCTCCCTCAACTGCAGTGGGTAGAGGTAGAGGTAGAGGAAGAGGGAGGGGAGCTGCTTCAAGCATCAGGTCCACTCAAACCAAGTCTGAGGAGCCACCCCTTATGGATTTGTTAGGGTAG 2769 0.4677 MKTLTQALAKTAAVIEKKVQTTVQEVTGPKALQDYDLLDQIASAGPGLAWRLYSARPKEPSRQQQYPLVCVWVLDKRVLSEARMRSGLTKAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNLENVANVPKELRGMDMGLLEVKHGLLQVAESLDFLHNHAQLIHRAISPENILITSSGAWKLGGFSFAVSAAQASGDSTGLQAFHYAEYDVEDSILPLQPSLNYTAPELVKSTVSSAGWASDIFSFGCVAYHLIARKPLFDCRNNVKMYMNTLTYLSSGTFSSIPPELVPDLQRMLSSNESSRPTAMAFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKSDFEITTLPALVPVLSAAAGETLLLLVKHAELLINKTSQDHLVSHVLPMVVRAFDENDARVQEEVLKKSISLAKQLDTQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVSRLDKSAVLDILQTIQRCTAVDRSPPTLMCTLGVANSIYKRYGVEFVAEHVLPLVIPLLTTQQLNVQQFAKYMLFVKDMLRMIEEKRGVVLTESGTPEVAKPFPPINGLHNEATTKTNSALASSTKSSSSWDEDWGSTAKGTFTSQSFTDKSSQSVPGIPMVQITSSQQHSSSSAVSNQQATMSCPSVDLEWPPRASAAGNQSLGDSESQMKTTGTSSMSSLDHIDPFANWPPRPSGSLGVSGISNNGSLAPPLNKNGPSLMSNSSNAMNNQTNNSWSFNPPSSADPVGLNLGDSSSTTGSLHGGINSLNSLAYLKQSHGFPASNVPRAENKSTDLGSIFASDQNDLIAPKLAPPPSTAVGRGRGRGRGRGAASSIRSTQTKSEEPPLMDLLG 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0004 922 MobiDBLite consensus disorder prediction 639 665 - -
Lele10g0004 922 MobiDBLite consensus disorder prediction 768 804 - -
Lele10g0004 922 SMART serkin_6 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0004 922 SUPERFAMILY ARM repeat 309 603 IPR016024 -
Lele10g0004 922 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 34 906 - -
Lele10g0004 922 SUPERFAMILY Protein kinase-like (PK-like) 32 344 IPR011009 -
Lele10g0004 922 Pfam Protein kinase domain 106 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0004 922 MobiDBLite consensus disorder prediction 876 922 - -
Lele10g0004 922 MobiDBLite consensus disorder prediction 729 753 - -
Lele10g0004 922 Gene3D - 345 616 IPR011989 -
Lele10g0004 922 MobiDBLite consensus disorder prediction 694 804 - -
Lele10g0004 922 ProSiteProfiles Protein kinase domain profile. 38 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0004 922 MobiDBLite consensus disorder prediction 694 715 - -
Lele10g0004 922 Gene3D Transferase(Phosphotransferase) domain 1 100 344 - -
Lele10g0004 922 CDD PK_SCY1_like 41 342 - -
Lele10g0004 922 MobiDBLite consensus disorder prediction 630 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0004 Lele-ChrLele10 18132 29953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0004 100 345 CBL-interacting serine-threonine protein kinases AT2G26980 24.506 8.76e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lele10g0004 Pkinase 2.2e-22 CL0016