Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele09g1311 | ATGCCTCTTCCTACTAAATCAATCAAGGCTGCTCAGGAAGGCGGTGGCACCGTCAAGGATTTCGAAGATCCTGAGACCCCTTCCAATAATCTATGGGTTGGCAATTTACCGCACGAGGTTACAGAGTCCGATCTTATGGCTCTCTTCTCCCAATACGGCGCTCTTGATAGCGTCACGTTGTATTCATCTCGGAATTACGGCTTCGTGTTTTTCAAGCGCGTCGAGGATGCCAAGGCTGCCAAGAACGCGTTACAAGGCACTCTTCTGCGCGGAATTCCCTTGAAGATGGAATTTGCGAGACCGGCAAAGCCATGTAAACAGCTTTGGGTGGGTGGTATTAGCCCAGCTGTTATAAAGGACGAACTGGAGGCTGAGTTTCACAAATTTGGTAAGATTGAGGATTTTAAGTTCATCAGAGACCGCAGCACTGCATTTTTGGAATATTTCAATTTAGATGATGCAATTCATGCCATGAAAATGATGAATGGAAAGCGTATCGGTGGCGACCAAATTCGTGTAGATTTCCTTCGATCACAATCATCAAAAAAGGATATGTTGCTTGAGTATGGGCAGTTTCAGGGAAAAATTATTGGCCCTCCTGATTTCTATGCTGGTCAGAAAAGACCACTGCAAACACAGCCTTCAGTTGGGATGAAGGCAGATAGTCAACCCACCAATATTTTGTGGATAGGTTATCCTCCTTCTCTTCAGATTGATGAGCAAATGCTCCACAATGCCATGATTTTATTTGGTGAAATTGAGAGAATCAAGAGCTTTCCTTCAAGGCACTACTCATTTGTCGAATTTAGGAGTGTGGATGAAGCTCGACGTGCCAAAGAGGGTCTTCAAGGTCGGCTTTTCAATGATCCTCGGATTACTATTATGTATTCAAGCAGTGAGTTGGCACCTGGCAAAGATTACCCTGGCATTTTCCCTGGAAGCAAAGGACCTAAAACTGACATGTTTGTAACTGAGCAAACATTTCGACCATTACAGATGGATGTGTTTGGCCATAATCGTCCTATGGTTCCAAATAATTTTCCTGGCCAGATAGCACCAGGTGTTATTGTTGGACCAAATGTACCATTGAGACCTTTCGGTCCTCAAGGTAGTCTTGAACCTTTGCTTTCAGGCAGTGAATTTAATGAACTGGGCACAAACCAAAAGTTTCAGGATGGTAGCTCCAAAAATCAAATGGGTCCAAATTGGAAACGGCCGTCTCCTCCAGCACCTGGGATGCTCCATTCTGCACCGGTTATTAGACCTACTACTAGATCCACATCTAGCGCATGGGATGTGCTTGACATAAACCAGTTTCAGAGGGATTCTAAGCGTTCAAGGATAGATGGTGCTTTACCTGTTGATGATGCTCCTTTTCCTTTAAGGAACGTTGATGATCGTGCAGTAGGGTTAGAGCAATCTTATGGGATGGAGCCAGTTATTGATGGTGGTTCTGGTCCATTTGTAAACATCCAAGGGAAGTCTCACCCTGGTCCAGTGGGCACAAGGATCTCAACTGGAGTGCCTGCTACTGCTCAAGTTGATATTGATCACATATGGCGTGGGATAATTGCAAAAGGGGGAACACCAGTTTGTCAAGCAAGATGTGTCCCTATAGGAAAAGGGATAGGGACTGAGCTTCCAGAAGTTGTTGATTGCTCAGCCAGGACTGGATTGGATATGCTAACAAAACATTATGCAGATGCTATTGGTTTTGATATTGTCTTCTTTCTACCAGACAGTGAAGATGACTTTGCATCATACACTGAATTTCTTCGTTACCTTGGCGCTAAAAACCGTGCTGGTGTTGCCAAATGTGTTGATGGTACCACTCTATTTTTGGTGCCTCCATCTGATTTCTTAACAAAGGTTTTAAAAGTCGCAGGGCCAGAACGTCTATATGGTGTGGTTCTTAAGTTTCCATCTATGCCAGGTGGTACATCATTGCAACAGCCTCTGCCCTTGTCTATACCTTCGACTCAGTATATTGATAGGAAGCAGGTTCCTCCTTCTCAAGTAGAGTATGGTCAGATCCCTGCAAAGGAGGAAGAAGTTTTGTCTATGGATTATAATAGATTGTTGCATGATGAGTCTAAAGTTCCTTCAAAACCACTTTATCCAGCAACAAGTGGCGCCTCTTTAGTTCAGTCTGTACCCTCAGATTATACTTCTAGCAATACTGCTGCAGTGACCCAACCTGGAGTTACGTTAACACCTGAGCTTATTGCCACTCTAGCCTCTTTGCTTCCTGGAACTACACAATCAGCTGCCACTGATGGTGCCAAGTCAGCAGTAGGATCCTCAAGCATGAAAGCTCCATTTCCTCCAGTTGTGCCCACTGACGGAAACCAATCTCATGTATGGAAACAGGACCATCAAATTGCTGATCCATCCAGCCATGTCCTTCAACAGGCAGATAGTACATACTATCAACCTTATTCACTATCATCTGCTTATGGCCATCCTGGTCAAGTGGTCCCTGGCAGTTCAAACATCCAGGATTCTGCTGCCAGCTTACAGCAGCAGGTTGGCATCTCATCTAGACCCATGAGTAACTTCTTGATGCCTTCTCAAAGCGGACAAGCAACTTTATCCCTCCCAGTGAATCAACCATATCAGATTGATGTCTCCTCCAGCTCTCAGAAAGGCTATGGAGTGGTGCCAGGAATAGAGGCCTCTGTTTTATATAGTTCTCAGGCTTTTCATAATCCTAATATTTCTGTTTCCTCGTCTAATCAAGTTCATGGTGCTAACCCTTCTCAGCAACAAACTGCTATGCCATATTCAGCAGACAAAGTGAACACAGAGCCTCCAAATCAGCAGTTTCAAGCTGCTCTCCAAGGAGCTAGTCAGGGCACATCATCAGAAGTGGAGGCAGATAAAAACCAGAGGTACCAGTCAACACTACAGTTTGCTGCCAGTCTTCTCCTCCAAATACAGCAGCAGCAGCAGCAACAAACCCAAGGAGGGCGCAGGGCTGGAAATCAACAATGA | 2994 | 0.4489 | MPLPTKSIKAAQEGGGTVKDFEDPETPSNNLWVGNLPHEVTESDLMALFSQYGALDSVTLYSSRNYGFVFFKRVEDAKAAKNALQGTLLRGIPLKMEFARPAKPCKQLWVGGISPAVIKDELEAEFHKFGKIEDFKFIRDRSTAFLEYFNLDDAIHAMKMMNGKRIGGDQIRVDFLRSQSSKKDMLLEYGQFQGKIIGPPDFYAGQKRPLQTQPSVGMKADSQPTNILWIGYPPSLQIDEQMLHNAMILFGEIERIKSFPSRHYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSELAPGKDYPGIFPGSKGPKTDMFVTEQTFRPLQMDVFGHNRPMVPNNFPGQIAPGVIVGPNVPLRPFGPQGSLEPLLSGSEFNELGTNQKFQDGSSKNQMGPNWKRPSPPAPGMLHSAPVIRPTTRSTSSAWDVLDINQFQRDSKRSRIDGALPVDDAPFPLRNVDDRAVGLEQSYGMEPVIDGGSGPFVNIQGKSHPGPVGTRISTGVPATAQVDIDHIWRGIIAKGGTPVCQARCVPIGKGIGTELPEVVDCSARTGLDMLTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLGAKNRAGVAKCVDGTTLFLVPPSDFLTKVLKVAGPERLYGVVLKFPSMPGGTSLQQPLPLSIPSTQYIDRKQVPPSQVEYGQIPAKEEEVLSMDYNRLLHDESKVPSKPLYPATSGASLVQSVPSDYTSSNTAAVTQPGVTLTPELIATLASLLPGTTQSAATDGAKSAVGSSSMKAPFPPVVPTDGNQSHVWKQDHQIADPSSHVLQQADSTYYQPYSLSSAYGHPGQVVPGSSNIQDSAASLQQQVGISSRPMSNFLMPSQSGQATLSLPVNQPYQIDVSSSSQKGYGVVPGIEASVLYSSQAFHNPNISVSSSNQVHGANPSQQQTAMPYSADKVNTEPPNQQFQAALQGASQGTSSEVEADKNQRYQSTLQFAASLLLQIQQQQQQQTQGGRRAGNQQ | 997 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele09g1311 | 997 | Pfam | SPOC domain | 516 | 631 | IPR012921 | - | |
Lele09g1311 | 997 | SUPERFAMILY | RNA-binding domain, RBD | 103 | 184 | IPR035979 | GO:0003676 | |
Lele09g1311 | 997 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 22 | 99 | - | - | |
Lele09g1311 | 997 | SUPERFAMILY | RNA-binding domain, RBD | 212 | 299 | IPR035979 | GO:0003676 | |
Lele09g1311 | 997 | SMART | rrm1_1 | 30 | 97 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | SMART | rrm1_1 | 227 | 295 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | SMART | rrm1_1 | 107 | 174 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | CDD | RRM3_Spen | 228 | 297 | - | - | |
Lele09g1311 | 997 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 108 | 172 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 238 | 292 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 31 | 91 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | CDD | RRM3_Spen | 108 | 177 | - | - | |
Lele09g1311 | 997 | Gene3D | - | 5 | 104 | IPR012677 | - | |
Lele09g1311 | 997 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Lele09g1311 | 997 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 226 | 299 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | MobiDBLite | consensus disorder prediction | 754 | 773 | - | - | |
Lele09g1311 | 997 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 106 | 178 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 29 | 101 | IPR000504 | GO:0003723 | |
Lele09g1311 | 997 | FunFam | Flowering time control protein FPA | 21 | 103 | - | - | |
Lele09g1311 | 997 | CDD | RRM3_Spen | 31 | 100 | - | - | |
Lele09g1311 | 997 | Gene3D | - | 206 | 302 | IPR012677 | - | |
Lele09g1311 | 997 | Gene3D | - | 105 | 185 | IPR012677 | - | |
Lele09g1311 | 997 | SUPERFAMILY | RNA-binding domain, RBD | 18 | 103 | IPR035979 | GO:0003676 | |
Lele09g1311 | 997 | FunFam | flowering time control protein FPA | 219 | 312 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele09g1311 | Lele-ChrLele09 | 21765186 | 21771996 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele09g1311 | 30 | 195 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 27.869 | 5.85e-13 | 70.9 |