Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1297 ATGGGGAAGGGAGCCACGTTGCAAGAAAGGGGGAGGGCATTATGGTCAAAATGGGAGGAAAGCGTACCAAATCTGGCCAGGCCGATAACAAAATACTATGCTCTGCATCACCTAGCTTTCCTTTCTTCCTCTTTTGGTGCCCATGCTCTGCCGCTACTGTTTTAGGACGGCCTGAACCAGCAGGGTCAGGCTCAGGCTCAGTCTCTGGCCATGCCGTCCGTCAATAATGAACCGTCGCTTCTGCGGCGCCAGCAGAACAACATGAATACTTACGAGAGTGCTCCTCGTAGTTTATACACTAGCTCGGCGAAACCGCCTCTGCCAAATCAGAGCCTCCTCTCGGCGAATCGGTTGCCACCTATGAAGACTGGACTTGGCAATACTACTTCTAATCTTACCAGGCATAATAGCTCCCCTGCAGGACTCTTTGCTGACTTCAGCGTTGATCCTGGCTATATTACGGCTGTGAGAGGTATGGGAACTTTTGCATCTGCAGATAACGCTACCGAAGCGACAAACTTTCCTTGTGCTGCAGGGACTTTGAAGAACCGACCGGCTTACTCGTCGGGGTTAATGTCATCCATAGCTGAAATCGGAGATAAAAACAGCATAGAATTAGATAATCCCCAGAAGGAGGGCTTTAGTGAAAGCCAGGGAAATGATTTTATGTCGGCTTTCCCTGTAGATCCTTGGGACGATTCTGCAATCATGTCAGACAATATTAGTGGTAATAAAAGATACAGAGATGATGAGAATGATGCAAAGCCATTTTCTGGTTTAAGTGCGGCGGAATTCAAGAATGAGATGGGAAGCCAGGGCAGTGGTCCTTCTCCATTGACTCATCACTTGAGTTTGCCAAAAACTGCAATGGAGATGGCAGCCATAGAGAAGATATTGCAGTACTCAGACTCTGTTCCCTGTAAAATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCCGAAGCATCGCAGAGCGGGTTAGAAGAACTAAAATTAGCGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCGACTACATTAAAGAGCTTCAAAAGCAGGTTCAGACAGCAGATCAAGATGTACGTGTTTGCAGAGGCAGCATCAATAAAGGGATGGAGGGCGGATGCAAGACCCGGCTTTTGTACAGATTTGTAAAGAATATGGTCGAGTAG 1218 0.4811 MGKGATLQERGRALWSKWEESVPNLARPITKYYALHHLAFLSSSFGAHALPLLFXDGLNQQGQAQAQSLAMPSVNNEPSLLRRQQNNMNTYESAPRSLYTSSAKPPLPNQSLLSANRLPPMKTGLGNTTSNLTRHNSSPAGLFADFSVDPGYITAVRGMGTFASADNATEATNFPCAAGTLKNRPAYSSGLMSSIAEIGDKNSIELDNPQKEGFSESQGNDFMSAFPVDPWDDSAIMSDNISGNKRYRDDENDAKPFSGLSAAEFKNEMGSQGSGPSPLTHHLSLPKTAMEMAAIEKILQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQVQTADQDVRVCRGSINKGMEGGCKTRLLYRFVKNMVE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1297 405 Gene3D - 316 386 IPR036638 GO:0046983
Lele09g1297 405 SMART finulus 321 371 IPR011598 GO:0046983
Lele09g1297 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 365 IPR011598 GO:0046983
Lele09g1297 405 Pfam Helix-loop-helix DNA-binding domain 320 366 IPR011598 GO:0046983
Lele09g1297 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 380 IPR036638 GO:0046983
Lele09g1297 405 MobiDBLite consensus disorder prediction 81 133 - -
Lele09g1297 405 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 102 375 - -
Lele09g1297 405 FunFam Transcription factor bHLH130 family 316 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1297 Lele-ChrLele09 21616413 21618862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1297 130 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 47.347 3.85e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g1297 HLH 5.3e-10 No_clan