Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1295 ATGGATTCAGCCACTCCACCGTCGCCGGAGCTGAAACTCGACAAGTTAAGAGCGCTCAAGGTCGTGGGTAAGGGTGCCATGGGTACCGTCTTCCTCGTCAACGATACCGTAGCTGATCCTTCTGCTCGCTGCCCCTTCGCCCTCAAGGTCGTCGAGAAATCCTCCGTCCAGAACAAGGTCGACGCCCACCGTCGTGCCCGCTGGGAAATCCATGTCCTCTCTCGCTTGACTCACCCATTCCTTCCTTCTCTTTTAGGGACGTATGAGAACCATCAATTCTTGGCCTGGGCCATCCCTTATTGTCCGGGCGGCGTCCTTCGTTACCGTCAAACTGATCGGCTCTTCGCCCCTCCCGTCATTCGCTTCTATTTAGCCGAGATCATCTGCGCTCTAGAGCATCTTCATGCCCTGGGCATCGCCTATCGAGATTTGAAGCCGGAGAATGTCCTTGTCCAGCAGTCCGGTCACGTGACACTCACGGACTTCGATCTGTCTCGCAATCTCACCCCCAAAACCATCAAAACCACCACCGCCGTCGAACAAAATCTGTCCGATATTAACCGAAGCAAGCGTCGCCGGAATTTCACGCGCTGGATTCCAGTCCCCCAAGACATTGTTCACAACAAGAGAGGATTGAAGAAGGCCAAGTCCGCCCGAGTCATCCCGGTGAGCAGAAGGAAAGCGAGTTTCTCAAATGGCGAGCGTTCAAACTCGTTCGTCGGCACAGAAGAGTACGTTTCGCCCGAGGTCGTCCGCGGCGAGGGACACGAGTTCGCCGTCGACTGGTGGGCCCTGGGCATATTGACGTACGAGATGCTGTATGGCACGACGCCGTTTAAGGGAAGGAATCGGAAAGAAACGTTTCGCAACATTTTGACGAGGGCGCCGGAGTTCGTGGGGAAGCGAACGACATTAACCCACTTGATCGGACGGTTGCTGCAGAAAGACCCCACAAAGCGATTGGGATACTTGCGCGGTGGCAACGAGATCAAGGAGCACGAGTTCTTCAGGGGGGTCCGATGGGACCTACTGACGGAGGTGGTACGGCCGCCTTATATTCCGTCGAGAGAGGATGGGGAGCGGACGGAGCGATGGAGTGGGGGCGGGGTGGACATAGTGGAATACTTTGAGAGATCAAGATGGGCGGCGTCGTTGCCAGCGTCACCGGAGGAACGCCGGGATACGTGTTTAACAGGATTCTAA 1203 0.5611 MDSATPPSPELKLDKLRALKVVGKGAMGTVFLVNDTVADPSARCPFALKVVEKSSVQNKVDAHRRARWEIHVLSRLTHPFLPSLLGTYENHQFLAWAIPYCPGGVLRYRQTDRLFAPPVIRFYLAEIICALEHLHALGIAYRDLKPENVLVQQSGHVTLTDFDLSRNLTPKTIKTTTAVEQNLSDINRSKRRRNFTRWIPVPQDIVHNKRGLKKAKSARVIPVSRRKASFSNGERSNSFVGTEEYVSPEVVRGEGHEFAVDWWALGILTYEMLYGTTPFKGRNRKETFRNILTRAPEFVGKRTTLTHLIGRLLQKDPTKRLGYLRGGNEIKEHEFFRGVRWDLLTEVVRPPYIPSREDGERTERWSGGGVDIVEYFERSRWAASLPASPEERRDTCLTGF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1295 400 PANTHER FLIPPASE KINASE 1-RELATED 10 357 - -
Lele09g1295 400 Gene3D Transferase(Phosphotransferase) domain 1 231 355 - -
Lele09g1295 400 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
Lele09g1295 400 Gene3D Transferase(Phosphotransferase) domain 1 105 177 - -
Lele09g1295 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lele09g1295 400 SMART serkin_6 16 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1295 400 FunFam Serine/threonine-protein kinase OXI1 104 170 - -
Lele09g1295 400 ProSiteProfiles Protein kinase domain profile. 16 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1295 400 FunFam Serine/threonine-protein kinase OXI1 234 355 - -
Lele09g1295 400 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele09g1295 400 Pfam Protein kinase domain 19 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1295 400 Pfam Protein kinase domain 230 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1295 400 SUPERFAMILY Protein kinase-like (PK-like) 13 359 IPR011009 -
Lele09g1295 400 FunFam Serine/threonine-protein kinase UCNL 16 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1295 Lele-ChrLele09 21604836 21606038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1295 11 389 AGC Kinase Gene Family AT3G20830 60.052 1.28e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele09g1295 Pkinase 4.1e-30 CL0016