Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1289 ATGACCGACCCCAATAATGCTTTCAATTCTCCCTTCCTTTTCTCTTGTTCCTTCAATAACTTTCCTTCTACTGATCATAATAACTCTCCTCCTCCAAGAGAAGCCCTACCTCTTCTTAACCTAAGCCCTCCGAGACTTGATGAAGATGATGATGTGAAAGAAGAAGCAGGCATGGCGTGTAGTTCTTTGAATGATGATCCTGTGACGCTGGCTTTGCAATTACACCTAGGGCTTCCAGCCGCAAGTACTTCGTCGCCTGACTTGCCCGATTCGAACTTGTACTCATCAGAGACACTAGTTTCAGACAAAGATGAAGTGACCACTGTGTCTTCTGGATATTTCTCCGATAGGATCACTCGAGGCGGTCAGTATTGGATCCCTACCCCTGCTCAGATTCTGATCGGCCCCACTCAGTTCTCTTGCCCTCTTTGTTTCAAGACCTTCAACAGGTACAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATATAGAAGGGGACCAGAGTCTCTGAGGGGAACACAGCCAACAGCAATGCTGAGGCTACCATGCTATTGTTGTGCGCCTGGGTGCAAGAACAACATCGAGCATCCCAGAGCCAAACCTCTGAAGGACTTCAGAACGCTTCAGACCCATTACAAGAGAAAGCATGGGATCAAACCTTTCATGTGTAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGGGATTGGAGAACGCACGAGAAGAACTGTGGAAAGCTCTGGTATTGCTCCTGTGGCTCTGACTTCAAGCATAAAAGATCTCTTAAAGATCATATCAAGGCTTTCGGACATGCCCACAAGCCTTGTGATGCTGATGATTGTCTCCATCAAGATGAGGTGATGGCGGCCTCTGAAATTGACCATCCAAATCATTCCTTTCACTCTCATCATACCTAA 921 0.4658 MTDPNNAFNSPFLFSCSFNNFPSTDHNNSPPPREALPLLNLSPPRLDEDDDVKEEAGMACSSLNDDPVTLALQLHLGLPAASTSSPDLPDSNLYSSETLVSDKDEVTTVSSGYFSDRITRGGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSEYRRGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHAHKPCDADDCLHQDEVMAASEIDHPNHSFHSHHT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1289 306 MobiDBLite consensus disorder prediction 24 55 - -
Lele09g1289 306 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Lele09g1289 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 166 IPR013087 -
Lele09g1289 306 SUPERFAMILY beta-beta-alpha zinc fingers 135 162 IPR036236 -
Lele09g1289 306 SUPERFAMILY beta-beta-alpha zinc fingers 205 243 IPR036236 -
Lele09g1289 306 FunFam Zinc finger protein WIP2 192 274 - -
Lele09g1289 306 Gene3D Classic Zinc Finger 138 161 - -
Lele09g1289 306 PANTHER ZINC FINGER PROTEIN WIP2 18 297 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1289 Lele-ChrLele09 21582791 21584642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1289 28 295 C2H2 Transcription Factor Family AT1G51220 65.125 2.83e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele09g1289 None None None