Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1280 ATGAGGAAGTCGCGGGAGCCCTCTGGAAAAAACAAGGAGCTTAGAAAGGGTTTGTGGTCGCCGGAAGAAGATGACAAGCTCATGATGTACATCCGCAACAATGGACAAGGCTGTTGGAGTGATGTGGCCAGAAACGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTATTTGAGGCCTGACCTTAAACGAGGCGCTTTCTCACCCCAAGAACAACAGCTCATCATCCATTTGCACTCCCTTTTTGGCAACAGATGGTCTCAAATAGCGGCACGCTTGCCAGGACGAACAGACAACGAAATAAAGAACTTTTGGAATTCCACAATTAAAAGAAGACTCAAGAACTTTTTGGCCACGAAAGATGTCAATATGGGAGGGTTTGTTTCAGGTCAAGATCAGCACAGCTTTAATGTCCCTATCTTGAACTCGTCTCCATCTTCATCCACAGTTGACAGGCTTCCTCCGCCAAGCTTGCCATGTGCAGGTGGATTACTCTCAGCAAGTCAAGTGGTGGAGAAAGTGGAGATCACGTGCCACGCACACACTACTACTACCAATGCTTACTTTGAAGACGTAAACAGTGAGAGAGCTGAGGTGGAGAATTTATTTGAACAAGAGTTAATGATGATGGGAATGGGAGAGTGGAATCTGGAGGATCTCATGAAGGATATTCCCTCATCTTCCTTCCTTGATTTTTCTGATCAACACTTCTGCCCCCACCCCATATGA 744 0.4637 MRKSREPSGKNKELRKGLWSPEEDDKLMMYIRNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEQQLIIHLHSLFGNRWSQIAARLPGRTDNEIKNFWNSTIKRRLKNFLATKDVNMGGFVSGQDQHSFNVPILNSSPSSSTVDRLPPPSLPCAGGLLSASQVVEKVEITCHAHTTTTNAYFEDVNSERAEVENLFEQELMMMGMGEWNLEDLMKDIPSSSFLDFSDQHFCPHPI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1280 247 SMART sant 68 116 IPR001005 -
Lele09g1280 247 SMART sant 15 65 IPR001005 -
Lele09g1280 247 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Lele09g1280 247 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele09g1280 247 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Lele09g1280 247 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele09g1280 247 CDD SANT 71 111 IPR001005 -
Lele09g1280 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele09g1280 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lele09g1280 247 FunFam Myb transcription factor 71 118 - -
Lele09g1280 247 Gene3D - 16 68 - -
Lele09g1280 247 Gene3D - 70 130 - -
Lele09g1280 247 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele09g1280 247 PANTHER MYB DOMAIN PROTEIN 55 9 153 - -
Lele09g1280 247 FunFam MYB transcription factor 13 69 - -
Lele09g1280 247 CDD SANT 19 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1280 Lele-ChrLele09 21497515 21498765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1280 12 124 MYB Transcription Factor Family AT5G12870 82.301 3.71e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g1280 Myb_DNA-binding 2e-13 CL0123