Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1262 ATGGCGTTATCCAAAACGGCAGGACCCGTTCCGGTGGCCCACAACGCTTCTCAACCGGCGAAGCTTCGGTGGGGCGAGCTTGATGAGGACGATGGGGAGGATCTAGACTTTCTGCTGCCGCCGCGACAGGTCATAGGTCCTGATGAGAATGGGATAAAGAAGGTCATTGAGTACAAATTCAATGATGATGGCAATAAGGTCAAGATTACAACCATCACCCGGACTCGAAAGCTTGCTAATGCTCGCCTCAGTAAGCGAGCCGTCGAGAGGCGATCCTGGGCTAAGTTTGGCGATGCTGTTCACGAGGATGTTGGTAGCTGGCTCACCATGGTATCCACCGAAGAGATCCTCCTCGAACGACCTAGGGCCCCTGGTAGCAAACCAGAAGAACCAAAGGTTGCTGGAGACCCGTTGGCACAAATCCAGAAAGGCGCTGTTCTCATGGTCTGTAGGACTTGTGGGAAGAAGGGTGATCATTGGACTTCAAGGTGTCCTTACAAAGATCTTGCCCAACCAGTTGAGGGATTTATTGATAAGCCTGCAGCTTCTGAAGCTGCAACTGCTGCTTCTGGTCCAGCTAAGGGAGCATATGTTCCTCCTGGCATGAGAGCAGGTGCGGAAAGGACTGGTGGATCAGACATGCGCCGTAGGAATGACGAAAATTCTGTACGTGTAACCAATCTCTCGGAAGACACGAGAGAGCCCGATTTACTCGAGCTGTTCCGTCCTTTTGGTGCTGTAAGCAGAGTCTATGTTGCTATCGATCAAAAGACTGGCATGAGCAGGGGATTTGGCTTTGTTAACTTTGTAAACAGGGAAGATGCACAGAGAGCTATTAACAAGCTCAATGGATATGGTCGCGCATCTATCATAAGAAATCTCGCTCTGCTCTCCCCAATTCACTCTCTGGTGTTTTTCGACCTCTTTTCTCTAGCTGCTATGGCATCCCTGATCGAATCTTCTTGGGAGTTTTTGATCTCACACTTCAGCGACTTTCAACTGGCATGTCTGGGCAGTTTCTTTCTCCATGAAAGTGTCTTCTTCTTATCAGGACTTCCCTTCATATGGCTTGAGAGGGCAGGATGGCTCAGCAAGTACAAGATTCAGGCAAAACTTGACAGCCCTGCAGCTCAGGAGAAATGTATTCTTCGCTTATTGCTGTATCATTGTGGAGTCAATCTGCCCGTTATGATATTTTCATATCCTGTTTTCAGATACATGGGCATGCGAAGTAGTCTTCCACTGCCCTCCTGGAAAGTAGTTTTAACGCAAATCCTCTTTTACTTCATTTTGGAGGATTTTGTATTCTACTGGGGACATAGGGTATTGCACACGAAATGGTTGTACAAGCATGTTCACAGTGTTCATCATGAGTATGCTACACCATTTGGACTTACTTCTGAATATGCTCATCCTGCTGAGATACTTTTCCTTGGCTTTGCTACCATTGTTGGTCCTGCAATCACGGGCCCTCACTTGTTGACTCTCTGGCTATGGATGGTTCTGAGGGTCCTGGAGACAGTTGAGGCTCACTGCGGTTATCATTTTCCCTGGAGTCCTTCTAACTTCTTACCGTTGTATGGGGGAGCTGATTTTCATGACTATCACCACCGTTTGTTATATACCAAGTCCGGAAACTACTCATCAACCTTCACCTACATCGACTGGATATTTGGAACTGATGTTGGTTACAGAAAGTTGAAAGCGTTAAAGAATGTGACAATCGCAGAGAACAGCAAGGAAAAGTAG 1749 0.474 MALSKTAGPVPVAHNASQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNDDGNKVKITTITRTRKLANARLSKRAVERRSWAKFGDAVHEDVGSWLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQIQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEGFIDKPAASEAATAASGPAKGAYVPPGMRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGRASIIRNLALLSPIHSLVFFDLFSLAAMASLIESSWEFLISHFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWLSKYKIQAKLDSPAAQEKCILRLLLYHCGVNLPVMIFSYPVFRYMGMRSSLPLPSWKVVLTQILFYFILEDFVFYWGHRVLHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLLTLWLWMVLRVLETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFTYIDWIFGTDVGYRKLKALKNVTIAENSKEK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1262 582 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 221 287 IPR000504 GO:0003723
Lele09g1262 582 SMART rrm1_1 222 292 IPR000504 GO:0003723
Lele09g1262 582 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 223 285 IPR000504 GO:0003723
Lele09g1262 582 MobiDBLite consensus disorder prediction 1 23 - -
Lele09g1262 582 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 21 301 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lele09g1262 582 FunFam Eukaryotic translation initiation factor 3 subunit G 185 300 - -
Lele09g1262 582 Pfam Fatty acid hydroxylase 426 560 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lele09g1262 582 CDD RRM_eIF3G_like 222 286 IPR034240 -
Lele09g1262 582 MobiDBLite consensus disorder prediction 188 222 - -
Lele09g1262 582 PANTHER STEROL DESATURASE 319 568 - -
Lele09g1262 582 Pfam Eukaryotic translation initiation factor 3 subunit G 43 169 IPR024675 -
Lele09g1262 582 Gene3D - 183 290 IPR012677 -
Lele09g1262 582 CDD eIF3G 50 168 IPR024675 -
Lele09g1262 582 SUPERFAMILY RNA-binding domain, RBD 187 285 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1262 Lele-ChrLele09 21404117 21410767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1262 20 299 Eukaryotic Initiation Factors Gene Family AT3G11400 67.846 1.03e-141 411