Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1259 ATGATCTCCGGTGACACCCTTCTCGAAAACTTTGATGCTTCCCTCGACGGACAGAATCCTCCTCTTTCCTCGTTCTCAAATGGTACCTTGGTCGACGGGCTTATTTTTAGCACCAGTTCAAATGAAGAATTACCGGTAATTAACAAATACTCCAATAACATTCTCAGATACATAACCGACATCCTCATGGATGAAGAAGACGACCTGGAGAATAAGCCCTGCATGTTGCAGCAATATTGCGTGGCACTCCAAGCAGTTGAAAAATCATTCTACGATGTCCTTACTCCCAGTTGCTCCGCATCGCCTGATCACAACCCAGCTCGTAATTTTTTTGATGATAACGTCAAAGATCCACCGTCTGCAAGTGGTTCAGAGAACAGCAACAGCTACAGCAGTCCCGATCATTCGAATGAGACCGATTGGTCCTGTTATTTATGTCCTGATCCATTAACAGGGACACAAGAATGCTATTCTCAAAAGAGGAGTCATCAGATAGATGATGTTACAGACGAGGAAGAGGGAAGAGAAAGTAAGATATCGGCGGTGTACTCGGAGGAGGATTCAGAGCAATCGGCGGTGTTCGATGAGCTAGTGGTTTGCCTGGGCGGAAAAGGTAATCAGGGCATGGATATAGACTCAAAAGGATCTCCTGGCAAGGCAAATCGTTCCAAGAAAGGGCCAAATAAAGGGGCAACAGTAGATTTATGGAATCTACTGATTCAATGTGCACAGGCGGTGGCAAACTACGACCAGAGGAATGCAAATGAGCTTCTGAAGCAGATAAGGAAGCACTCTTCTCCATTTGGGGATGGGATTGAGCGTTTATCTTATTACTTTGCCAATGGACTGGAAACGCGTTTGGCTGCTGGGAAGCCATCTTATATGCCGCTCCATTCCAACGGGGTTTCTGCTGCTGATATGTTGAGAGCTTGCAAGCTATACATCACAGCTTCTCCATTCCAGAGAGTCACCAATTTCATGACAAACCCAATGATCTTGAAGCAAGTTGAGAACGGAAGAAGCCTTCATATTATTGACTTTGGGATTAACTATGGTTTCCAGTGGCCTTGCCTTATTTATCGTCTTTCAATCAGATCAGGAGGACCGGTCAAGGTTCGGATAACAGGAATCGATTTTCCTCAGCCGGGATTTCGCCCCACCGAGAGGCTTGAGGAGACAGGCAGGCGTTTGGCTAATTATAGCAGAAGGATGAATGTGCCATTTGAGTACAATTGCGTTGCACAGAAATGGGAAACCATACAACTTAAGGATCTCAAAATAGACCCAAGTGAGGTAACAGTCGTGAACTGCATGTACAGAATGAAGAAGCTACCAGATGAGACTGTGGAGGTGGAGTGTCCGAGAGATGCTGTTTTGAAGATCATCAGGGAGATTAAACCAAGCCTCTTTATGCATGGAATTGCCAATGGCACCTATAATGCGCCATTTTTCCTAACTCGGTTCAAGGAGGCGCTGTTCCACTTCTCGACATTGTATGATGTTCTTGAGGCTAACGTGGGGCGTGAAGATCCGCAGAGGGTGATGGTTGAGAAAGAGATATTTGGGAAGGATGCGATGAATGTGATAGCGTGTGAGGGGGCGGAGAGAGTAGAAAGGCCAGAGACATACAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGATTCAAGCAAATATGCTTGGATTCTGAACCGCTCAAGAAAGCAAAAGAATTTGTGAAGACGGAATACCATAAAGATTTTGTGGTCGAGGAAAATGGCAAATGGGTTTTGCTGGGATGGAAAGGCCGTACTATTCATGCTCTTTCCTGTTGGATACCTGCTTAA 1824 0.4567 MISGDTLLENFDASLDGQNPPLSSFSNGTLVDGLIFSTSSNEELPVINKYSNNILRYITDILMDEEDDLENKPCMLQQYCVALQAVEKSFYDVLTPSCSASPDHNPARNFFDDNVKDPPSASGSENSNSYSSPDHSNETDWSCYLCPDPLTGTQECYSQKRSHQIDDVTDEEEGRESKISAVYSEEDSEQSAVFDELVVCLGGKGNQGMDIDSKGSPGKANRSKKGPNKGATVDLWNLLIQCAQAVANYDQRNANELLKQIRKHSSPFGDGIERLSYYFANGLETRLAAGKPSYMPLHSNGVSAADMLRACKLYITASPFQRVTNFMTNPMILKQVENGRSLHIIDFGINYGFQWPCLIYRLSIRSGGPVKVRITGIDFPQPGFRPTERLEETGRRLANYSRRMNVPFEYNCVAQKWETIQLKDLKIDPSEVTVVNCMYRMKKLPDETVEVECPRDAVLKIIREIKPSLFMHGIANGTYNAPFFLTRFKEALFHFSTLYDVLEANVGREDPQRVMVEKEIFGKDAMNVIACEGAERVERPETYKQWQVRNQRAGFKQICLDSEPLKKAKEFVKTEYHKDFVVEENGKWVLLGWKGRTIHALSCWIPA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1259 607 MobiDBLite consensus disorder prediction 105 135 - -
Lele09g1259 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 595 IPR005202 -
Lele09g1259 607 Pfam GRAS domain family 237 604 IPR005202 -
Lele09g1259 607 ProSiteProfiles GRAS family profile. 226 605 IPR005202 -
Lele09g1259 607 MobiDBLite consensus disorder prediction 162 187 - -
Lele09g1259 607 MobiDBLite consensus disorder prediction 119 135 - -
Lele09g1259 607 MobiDBLite consensus disorder prediction 208 228 - -
Lele09g1259 607 MobiDBLite consensus disorder prediction 162 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1259 Lele-ChrLele09 21385993 21387816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1259 50 606 GRAS Transcription Factor Family AT2G29060 42.834 6.04e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele09g1259 GRAS 2.4e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1286 30 15357912 15359215 Lele09g1259 09 21385993 21387816 CCT
Lele09g1259 09 21385993 21387816 Lele11g1262 11 19563997 19565814 hybridization
Lele09g1259 09 21385993 21387816 Lele12g0060 12 548875 550707 hybridization