Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1257 ATGGATTCTAATTGCATCTCCAGTTTCATCCACGGATATCAATCCACCCAAACACCTGTCCCGCTCAATTATGATCAGTATACCGATCCCTTAAATGGAATTCAGATACCCGATCCGTTAATGAGCTTCGGATCTGTGGATACAGACTTTGCCGGCAATCCTGCTTCGCTGTCTTCCGTTAGTACGAATGTAGGCTCTCCCTTGGACGAGACCGAGTTCTCTGGCACTATGCTCGGGTACATAAACCAAATGCTAATGGAAGAGGACATGGGAGACAAGCCCAGCATGTTTCATGATTCCTTGGCTCTTCAAGCGGCCGAGGAATCTTTATACGAGGTTATTGGGAAGAAATACCCTTCCGATTCCTCCAATCAACATCATCTTTCCGACTATCACCGTGTGGAGACCTCCGAGGAAAGTGTCTCCGGCAACATCAGTGATTATAGCAGTAGTGGCGGTTATGCAGCTAACGGTACCAGCAACTCCGTTGAATCCCGGGGGAGTAACTTGGACTTTACAGAGTACAAACCTTCTCTTCTACAAGCCACGTTTCCTGTAGACTTCATTTTCCAGTCTCCTTCAACATCAACAGCACAACTTTCCACCAACAATTTGATCACCTCCAGGAATACTAGCCGTGAATATAATGGTTTCGTGGGGAATTACAGTCCAGGGACTGGCTTCTCAGATTCTACATTACCTAGCAAGGATGATTCTCTGTTTCAATTTAAGAGAGGTATGGAAGAAGCCAGTAAGTTTCTTCCCAAGGACAATCATTTGATTATTGACATAGGGCCCAGCATCATTTCTCCTCCATTTGAAAAGACTCTAGAGGCCGTAGTCAAGACGGAGAGATACGAAATGGAGCCTCACGTACCTGTTGAGTCAAGAGGAAGGAAGAATCATGAACGGGGAGATGAGATATATTTAGAGGACACAAGAAGCAGGAAGCAGCCAGCAGTTTACGTGGATGAGAGCGAGCTATCGGAATTATTTGACAAGGTGCTTATTAACACAGGCTGGGGAAAAGACCCTCCTCCCATGTGTATTTGCCATGAGAATTGTAATCATGGACATGGAGCAAACACGAGAATGAAGAAAAAGGAAGACCCAAATAAGTCTAGAGATGGAAGGAGCCGTGTTAGAAGACAGAGTTATAATAACTACAATGAAGCGGTGGATCTGAGATCATTGCTTATTCAATGTGCACAAGCTGTATCCTCTGATGATCGTGGAACTGCTAATAAGTTATTAAAGCAAATCAGGCAGCATTCTTCCTCAACAGGAAGTGGATCTCAGAGGTTGGCTCACTGCTTTGCAAATGCCCTTGAAGCGCGCTTGGCCGGCACGGGCTCTCAGATCTACGCTGCTTTATCCTCCAAGAGAACTTCTGCTGCAGACATGATCAAAGCATACCAAATGTTTATTACAGCTTGTCCATTCCAGAAGATTGCCGTTATTTTTGCAAACCATACAATTATGCATCTCATCAAAGATGCAGAAACACTTCACATTGTCGATTTCGGCATTGGTTATGGCTTCCAATGGCCTTCCTTTATCTTTCGTCTCTCCAAACGAACCGGTGGAACCCCTAAGCTGCGCATCACAGGGATCAATCTCCCACAACCTGGTTTGAGGCCGGCAGAGAGAGTCCAAGAGACAGGGCGGCGCCTTGCGAGGTATTGTAAGCGCTACAATGTTCCATTTGAGTATAATGCTATTGCACAGAAATGGGAAACCATCAGGCTTGAAGACCTGAAGATAAAGAAGGATGAACTCGTGGTTGTGAATTGTCAGAAGCGATTTAAGAATCTTCTTGATGAGACGGTGGTGGTGAATAGTCCTAGAGACACTGTTTTAAAGTTAATTAGGAAGGCAAACCCCAGTCTTTTCCTGCAGACTATAGTCAACGGGTGCTATAATGCGCCATTCTTCGTGACGCGTTTCCGGGAGGCTCTGTTCCATTACTCTTCAATGTTTGATATGCTTGACACTAACGCTGATGGTGGAGATCCAACGAGGTTGATGTTTGAAAAGGAGTTTATCGGAAAAGAGGTAACGAATATCATAGCTTGTGAGGGTTTTGAGAGGACTGAGAGGCCTGAGACGTACAAGCAATGGCAGGTCAGGAACATGAGGGCAGGGTTCAGGCAGCTGCCGTTGGATCGGCAACTGGTCGGTAAATTAAGAGGCAAGTTGAGACAAGTGTTCCACAGTGACTTTATGCTCGATGAAGATGGCAATTGGATGCTACAAGGTTGGAAGGGCCGAATTATTCATGCTTCCTCCTGTTGGGTGCCTGCATAG 2307 0.4564 MDSNCISSFIHGYQSTQTPVPLNYDQYTDPLNGIQIPDPLMSFGSVDTDFAGNPASLSSVSTNVGSPLDETEFSGTMLGYINQMLMEEDMGDKPSMFHDSLALQAAEESLYEVIGKKYPSDSSNQHHLSDYHRVETSEESVSGNISDYSSSGGYAANGTSNSVESRGSNLDFTEYKPSLLQATFPVDFIFQSPSTSTAQLSTNNLITSRNTSREYNGFVGNYSPGTGFSDSTLPSKDDSLFQFKRGMEEASKFLPKDNHLIIDIGPSIISPPFEKTLEAVVKTERYEMEPHVPVESRGRKNHERGDEIYLEDTRSRKQPAVYVDESELSELFDKVLINTGWGKDPPPMCICHENCNHGHGANTRMKKKEDPNKSRDGRSRVRRQSYNNYNEAVDLRSLLIQCAQAVSSDDRGTANKLLKQIRQHSSSTGSGSQRLAHCFANALEARLAGTGSQIYAALSSKRTSAADMIKAYQMFITACPFQKIAVIFANHTIMHLIKDAETLHIVDFGIGYGFQWPSFIFRLSKRTGGTPKLRITGINLPQPGLRPAERVQETGRRLARYCKRYNVPFEYNAIAQKWETIRLEDLKIKKDELVVVNCQKRFKNLLDETVVVNSPRDTVLKLIRKANPSLFLQTIVNGCYNAPFFVTRFREALFHYSSMFDMLDTNADGGDPTRLMFEKEFIGKEVTNIIACEGFERTERPETYKQWQVRNMRAGFRQLPLDRQLVGKLRGKLRQVFHSDFMLDEDGNWMLQGWKGRIIHASSCWVPA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1257 768 MobiDBLite consensus disorder prediction 359 386 - -
Lele09g1257 768 Pfam GRAS domain family 395 765 IPR005202 -
Lele09g1257 768 ProSiteProfiles GRAS family profile. 386 766 IPR005202 -
Lele09g1257 768 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 331 755 IPR005202 -
Lele09g1257 768 MobiDBLite consensus disorder prediction 359 382 - -
Lele09g1257 768 MobiDBLite consensus disorder prediction 138 166 - -
Lele09g1257 768 MobiDBLite consensus disorder prediction 121 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1257 Lele-ChrLele09 21369406 21371712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1257 77 768 GRAS Transcription Factor Family AT1G07530 53.138 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele09g1257 GRAS 1.8e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1257 09 21369406 21371712 Lele11g1260 11 19549543 19556517 hybridization
Lele09g1257 09 21369406 21371712 Lele12g0062 12 558817 561351 hybridization