Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1251 ATGAAGTGCTTCCATTTCTCATACGGGGGACCTGATCCCCGAGTAGACAATCATCACTCTGTTAACTCCAAGGCTTCCAAGCTCTACTGGGCTCGCTCGCTCAGCGTCGCTTCTTCTACCTTGGGCTCAAGGAGGTCTGAGTTTGATTCTGATTCAAAGGACTTATCCGATGCAGTTGAGTTCCAAAAATTCTTGTCTCGGCGGCGAGCTAATGATTTGCGCGTTTTTTCCTTCTCTGAGCTTAAATTGGCAACTCGTGGATTCAGTAGAGCCCTTTTGATTGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTGTCAGGGCGCCCAACCAGAGTGCAAATGACGGTTCTCTTTCCAATATGGATGTTGCGATCAAGCAATTGAACCGTAATGGACCCCAGGCATGCTCCGGGCACAGGGAATGGATCAATGAAGTAAACTTGTTGGGTGTAATCAAGCATCCAAATCTTGTGAAGCTAGTGGGATATTGCGCCGAAGATGATGAGAGGGGAATTCAGTGGCTTCTAGTCTATGAGCTTATGCAGAATAAGAGCTTGGAAGATCATCTTTTGGGACGAGTGCCATCAGCACTCACATGGATAGCAAGATTAAGAATTGCTCAAGATGCTGCCCGTGGATTGGCATATCTGCATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTTAAGACATCCAATGTCCTGCTGGATGAGGGCTTCAATGCAAAGCTTTCTGATTTCGGACTTGCTAGGCAAGGACCCTCAGAAGGATTTGGCCATGTTTCAACATCTGTTGTGGGCACTATTGGTTATGCTGCACCAGAGTATGTTCGTACTGGTAAGTTAACTGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTATGAATTCATTACTGGGAGGCGAGCTGTTGAGAGAAACCTACCAAGAAATGAACAAAAGCTTTTGGAATGGGTAAGAAATTATGTTTCTGACCCCAGAAAGTTCCATCTTCTGGTAGACCCACGACTTGAAGGAAAATATTGCATCAAATCAGCTCAAAAACTTGCAACCCTAGCAAACAAGTGTCTTACAAAACACCCGAAGTACCGGCCTAAAATGAGTGAAGTGGTTGAGACGCTTGGAAGCATAATTAACGAGACAATTTCTCAGTTTGAATGCACTCTTCAAGCTGTCGCAAGTGAAGAAGAAAAAGAAGCGAAGTTGTCTGAAGAGGACACTAAATCTGGGGCTGCTAAACAAGGGAATAATTATCTGAAGAAGGTCTTGGACTTCAGAGAAATGATGAGTTTAAGAAACAAGTCCATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGTTTGCTGCGAACTTGGTAA 1368 0.4437 MKCFHFSYGGPDPRVDNHHSVNSKASKLYWARSLSVASSTLGSRRSEFDSDSKDLSDAVEFQKFLSRRRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVVRAPNQSANDGSLSNMDVAIKQLNRNGPQACSGHREWINEVNLLGVIKHPNLVKLVGYCAEDDERGIQWLLVYELMQNKSLEDHLLGRVPSALTWIARLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDEGFNAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVRTGKLTAKSDVWSFGVVLYEFITGRRAVERNLPRNEQKLLEWVRNYVSDPRKFHLLVDPRLEGKYCIKSAQKLATLANKCLTKHPKYRPKMSEVVETLGSIINETISQFECTLQAVASEEEKEAKLSEEDTKSGAAKQGNNYLKKVLDFREMMSLRNKSIRRLDWKNWAPGLLRTW 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1251 455 ProSiteProfiles Protein kinase domain profile. 88 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1251 455 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 182 390 - -
Lele09g1251 455 PANTHER OS01G0588500 PROTEIN-RELATED 52 379 - -
Lele09g1251 455 SUPERFAMILY Protein kinase-like (PK-like) 70 377 IPR011009 -
Lele09g1251 455 CDD STKc_IRAK 94 380 - -
Lele09g1251 455 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Lele09g1251 455 Gene3D Transferase(Phosphotransferase) domain 1 182 403 - -
Lele09g1251 455 Pfam Protein tyrosine and serine/threonine kinase 94 377 IPR001245 GO:0004672|GO:0006468
Lele09g1251 455 Gene3D Phosphorylase Kinase; domain 1 66 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1251 Lele-ChrLele09 21335270 21337617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1251 3 378 Glycoside Hydrolase AT3G07070 43.536 1.15e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele09g1251 PK_Tyr_Ser-Thr 1.6e-45 CL0016