Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1250 ATGGTGCCTAATAATTTTATCTTCTTGAGTGTTTCCCATAGCAACAAGGGGAAGGGATTAATTCTTGTTTCTGGCATGGGTGTTTGTTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGCAACACAGGGTTAAATTCAAAATATGTGAGCAGTGACGGGAAGGATGGTAGCAGCACAGGGAGCAAGGTGTCGGCAGTGTCAGTTCCTCAAACTCCGAGGAGTGAGGGAGAGATCTTGCAATCATGTAATTTAAAGAGTTTCACTTTATCAGAACTGAAGACGGCCACCAGAAACTTCCGTCCAGATAGTGTGTTAGGAGAAGGTGGCTTTGGATCAGTGTATAAAGGGTGGATCGATGAGCACTCTCTGGCTGCTTCCAAACCTGGCACCGGCAAGGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTCCAAGGTCACAAGGAGTGGTTGGCTGAAGTGAACTACCTTGGACAGCTTTCTCATCCTCATCTGGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTGTATGAATTCATGCCTCGAGGAAGCTTGGAGAATCATTTGTTCAGAAGAGGTTCATATTTTCAACCTCTCGCATGGAGCCTGCGGATGAAGGTTGCTCTTGGTGCTGCAAAAGGCCTTGCGTTTCTTCACAGCGGCAACATCAAAGTGATATACCGGGATTTCAAGACTTCTAATGTCTTACTGGATTCAAAATATAATGCAAAACTCTCTGATTTTGGGCTGGCAAAAGATGGACCAACGGGTGACAAGAGTCATGTCTCAACCAGGGTCCTGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGCCACCTCACGGCGAAGAGCGATGTGTATAGTTTTGGAGTAGTGCTGCTGGAAATGTTATCGGGGCGACGAGCTGTTGATAAGAATAGGCCATGCGGTCAGCACAATTTGGTGGAATGGGCTAAGCCATGTCTGGCAAACAAAAGGAAGATCTTTCGCATTATGGACAGTCGTCTGGAAGGTCAGTATTCGATCGACGAGGCTCATAAGACGGCAATGCTGGCGCTGCGATGCCTCTCCGGTGAGCCCAAGATAAGGCCTGACATGGATGAGGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCCGTTGATGAAAGTGGAAACCGTCAAAACTCTCGGTCTCGTGCTCGGAGAAGAAGCGCCGGTGACTTTAACGGTAGGAGGGCTTATCCCAGGCCCTCTGATTCTCCACTTCACGCTTTACAGCACAATCTTGTTTGTTAA 1299 0.4719 MVPNNFIFLSVSHSNKGKGLILVSGMGVCLSAQIKAESPCNTGLNSKYVSSDGKDGSSTGSKVSAVSVPQTPRSEGEILQSCNLKSFTLSELKTATRNFRPDSVLGEGGFGSVYKGWIDEHSLAASKPGTGKVIAVKRLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLAWSLRMKVALGAAKGLAFLHSGNIKVIYRDFKTSNVLLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVLGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLANKRKIFRIMDSRLEGQYSIDEAHKTAMLALRCLSGEPKIRPDMDEVVKALEQLQVSVDESGNRQNSRSRARRRSAGDFNGRRAYPRPSDSPLHALQHNLVC 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1250 432 CDD STKc_IRAK 105 384 - -
Lele09g1250 432 Gene3D Transferase(Phosphotransferase) domain 1 185 408 - -
Lele09g1250 432 Pfam Protein tyrosine and serine/threonine kinase 103 381 IPR001245 GO:0004672|GO:0006468
Lele09g1250 432 ProSitePatterns Protein kinases ATP-binding region signature. 105 137 IPR017441 GO:0005524
Lele09g1250 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Lele09g1250 432 SUPERFAMILY Protein kinase-like (PK-like) 74 381 IPR011009 -
Lele09g1250 432 Gene3D Phosphorylase Kinase; domain 1 74 184 - -
Lele09g1250 432 FunFam Probable serine/threonine-protein kinase PBL8 185 401 - -
Lele09g1250 432 MobiDBLite consensus disorder prediction 395 410 - -
Lele09g1250 432 MobiDBLite consensus disorder prediction 51 70 - -
Lele09g1250 432 PANTHER OS01G0588500 PROTEIN-RELATED 64 385 - -
Lele09g1250 432 MobiDBLite consensus disorder prediction 388 422 - -
Lele09g1250 432 FunFam Serine/threonine-protein kinase BIK1 66 184 - -
Lele09g1250 432 ProSiteProfiles Protein kinase domain profile. 99 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1250 Lele-ChrLele09 21326517 21333518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1250 77 391 Glycoside Hydrolase AT3G07070 50.316 3.53e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele09g1250 PK_Tyr_Ser-Thr 7.1e-45 CL0016