Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1247 ATGGGCAACGGCGTATGCAAGTTGACCGTTTGCTTTACCGGCGGTAGGGGCCGTCATCGGAAGCAGGACATATCTTATTTGATAACTCAGCCTCTTGACGAGGGACTGGGCCACTCCTTCTGCTATGTTAGGCCCGACCCGACCCGTCTGTCTTCGTCCAAAGTCCACTGTGAGGAGACCACCACCTTCCGAACAATCTCCGGCGCATCTGTGAGTGCCAACACGTCTACCCCTCTTTCCACAGCCTTCGTTGATTTGTACTCTTACGGTTGTATCGATAGAGCTGCAGCTTTCGAGAGTTCAACTTCTTTTGCTTCCCTTCCTCTGCAGCCAATCCCGAGAAATCTCATGAATTCCGGTCCATTCTCGGGAAATCTTGGTCTGATTCCTGGATCGGGTCCGCTTGAACGAGGGTTTATGTCTGGTCCAATAGAGCGTGGATTCATGTCGGGTCCAATCGATCGGGGCTTGTTTTCGGGTCCGATGGAAAAGGGTAGTTCTGATCAATTTCAAAGAAGCTACTCACACGGGGGTTTTGCGTTTAGACCCAGAACGCGAAAAGCCCGATGGATTCAAGTTCTTCAGAGGGCGATTTCAAAGACATTATCTCAGGGACAACACTCAATTGTCTCCTCGATCAAAGGGATCAAAGAACCGGAGTGGATTATCGAACCAGAGAGGCACAACGAGAATATGATGGTAAGTAGTGTGAATTTCAGCAGCGATGGTAGCTTAGAAGATGATGATTCAATGGAAAGTCAAAATCTTCAATGGGCTCAAGGTAAAGCGGGTGAGGACAGAGTCCATGTTGTGGTATCAGAGGAACACGGTTGGGTTTTCGTGGGGATTTACGATGGTTTTAACGGTCCTGATGCTCCCGATTACCTTCTGTCTAATTTGTATGGTGCTGTTCATAAAGAATTGAAGGGATTATTATGGGACGACGGGTCTGAATCCTGCAACGCCACCCCCGACATGTCCGGTCTTCCGACGAATATTTCTAATCTAGAAGTGGAAGAATCGTTACAAAGCAGTGATCATGATGATGTTGGGAAGGGTAGGATGGGAAATGCTTGTTCTCAATGTGTTGAGCAGGAGAAGGATGCATGCACAAGTGGAGATGCGGATATAGAGAAGAGAAAGCAAGGTAAGAATGGTAACAGCAAGTACAACGGGGCAACGAAGAAATGGAAAGAGAATCATAGAAGGTGGAAGTGTGAGTGGGATCGAGAAAGAGTAGAGCTTGATAGGAGATTAAAGGAACAGTTGAATAGATCTGATTCTGGTGACTGTAATAACAACCCAATAAATCATTCAGATGTGTTGGAAGCTCTTTCGGAAGCTCTGAGAAAAACAGAGGAGTCTTACTTAGAAATCGCAGATAAGATGGTGATGGAAAATCCGGAGCTAGCTCTGATGGGTTCTTGTGTTCTTGTAATGTTAATGAAAGGAGAGGATGTTTATGTGATGAACGTCGGCGATAGCAGAGCCGTATTGGGTCAAAAGGCAGAGCCTGATTATTGGCTTGGCAAAATCAAGCAGGACTTGGAGAGAATCAATGAAGAAACAATGCATGATCTTGAATGTTTGGACGATGATAGATCAAGTTTGGTGCCTAGCCTAAGCGCATGTCAGCTAACCAAGGATCATTGTACCAACATTGAGGAAGAAGTCCAGAGAATACTGAGAGAACACCCAGATGATGCTTGTGCAATGCTAAATGATCGTGTTAAGGGTTCCCTGAAGGTTACCCGAGCATTCGGTGCCGGATATCTCAAACAGCCGAAGTGGAACAATGCTCTTCTGGAGATGTTCAGAATAGATTATGTGGGAACTTCTCCATACATAACGTGCCAGCCATACCTAAAGCATCACAGATTAGGGGCAAAGGACAAATTTTTGATACTATCATCCGATGGACTTTATCAATACTTGACGAACGAAGAAGCTGTGGCCGAAGTTGAGCTTTTCATAACGTTGCAACCAGAGGGAGACCCAGCTCAGCATTTGGTTGAAGAAGTTCTCTTCCGTGCTGCAAAGAAAGCTGGTTTGGATTTCCACGAGTTGCTGGAAATACCTCAGGGAGACAGGCGTCGTTACCATGATGATGTTTCTATAATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCCTGTGTATAA 2163 0.4577 MGNGVCKLTVCFTGGRGRHRKQDISYLITQPLDEGLGHSFCYVRPDPTRLSSSKVHCEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGLIPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEKGSSDQFQRSYSHGGFAFRPRTRKARWIQVLQRAISKTLSQGQHSIVSSIKGIKEPEWIIEPERHNENMMVSSVNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGAVHKELKGLLWDDGSESCNATPDMSGLPTNISNLEVEESLQSSDHDDVGKGRMGNACSQCVEQEKDACTSGDADIEKRKQGKNGNSKYNGATKKWKENHRRWKCEWDRERVELDRRLKEQLNRSDSGDCNNNPINHSDVLEALSEALRKTEESYLEIADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLGQKAEPDYWLGKIKQDLERINEETMHDLECLDDDRSSLVPSLSACQLTKDHCTNIEEEVQRILREHPDDACAMLNDRVKGSLKVTRAFGAGYLKQPKWNNALLEMFRIDYVGTSPYITCQPYLKHHRLGAKDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1247 720 SUPERFAMILY PP2C-like 262 712 IPR036457 -
Lele09g1247 720 MobiDBLite consensus disorder prediction 370 385 - -
Lele09g1247 720 Coils Coil 513 533 - -
Lele09g1247 720 CDD PP2Cc 415 711 IPR001932 -
Lele09g1247 720 PANTHER PROTEIN PHOSPHATASE 2C 246 709 IPR015655 GO:0004722|GO:0006470
Lele09g1247 720 Coils Coil 442 462 - -
Lele09g1247 720 Gene3D - 227 716 IPR036457 -
Lele09g1247 720 MobiDBLite consensus disorder prediction 370 393 - -
Lele09g1247 720 Pfam Protein phosphatase 2C 437 667 IPR001932 -
Lele09g1247 720 SMART PP2C_4 249 709 IPR001932 -
Lele09g1247 720 ProSiteProfiles PPM-type phosphatase domain profile. 248 711 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1247 Lele-ChrLele09 21308442 21310955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1247 1 720 PP2C-type Phosphatase Gene Family AT2G28890 66.529 0.0 936