Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1244 ATGGTTTTCTCTTCTATTCCGGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACAGAATTATCTTCAAACAAATGAGACCAGTGAGCTTCCACCTCTGCCTCCACAAGCCCCTCATATGGGCTCAATCAGGCCTGGATCTATGGCGGATCGAGCCCGGCTAGCGAAGATACCGCCGCCGGAGGCAGCTCTAAAGTGTCCTCGCTGTGAATCTACCAACACAAAATTCTGCTACTTTAACAACTACAGCTTGTCTCAGCCCAGGCACTTCTGCAAGACATGTAGGCGTTACTGGACAAGAGGAGGTGCTATCAGGAACGTTCCGGTTGGCGGAGGATGCCGCAGAAACAAGAAGACCAAGAGAAGCCGCTCCAAGTCTCCGGCAGAATCTGTCAAAGAGCCAACGTCCGACGCCACAGGCGGGGCCGCCATAGCCACGGAGCTGATTGGTCAATTGCCGTCCCAAGCATCAAATTTATCATTCCTGGCGTCCTTACAGGATCTGAGTCGCTATGGTGTGGGAAGCATGGGCCTAAGCTTGCAAGGACAGAGTGATCACATGTTTTCCATTGGACTTAATTCAAGCGGAGGACTGGATCAGTGGCGGTTAAAGCAGTTTCCTTTCTTGAATAATGGTTTTGATCAATCAAGTTCAGGTGCTTCTGCTTCTGCCGCTTCATCAAACCCATTTCAAATCGAACTTGGGAGTTCTAGGGTTATGCAAATGCCTCCAGTTAAAATGGAAGACAATAATGGAGCCCTAAATTTGTCTAGGTCATCGCAAGCTCCGAGTATATCAGAAAATAACAACCAATTATACTATTCATGGACTCCTACCACTGAAATTATATCAGGCCTTGCATCTTCTTCCACGACCCATGTCTTGTAA 888 0.4809 MVFSSIPVYLDPPNWQQQQNYLQTNETSELPPLPPQAPHMGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAIRNVPVGGGCRRNKKTKRSRSKSPAESVKEPTSDATGGAAIATELIGQLPSQASNLSFLASLQDLSRYGVGSMGLSLQGQSDHMFSIGLNSSGGLDQWRLKQFPFLNNGFDQSSSGASASAASSNPFQIELGSSRVMQMPPVKMEDNNGALNLSRSSQAPSISENNNQLYYSWTPTTEIISGLASSSTTHVL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1244 295 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Lele09g1244 295 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677|GO:0006355
Lele09g1244 295 MobiDBLite consensus disorder prediction 108 139 - -
Lele09g1244 295 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
Lele09g1244 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 217 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1244 Lele-ChrLele09 21288082 21289144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1244 34 294 C2C2-Dof Transcription Factor Family AT3G55370 44.599 5.04e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele09g1244 zf-Dof 2.2e-32 No_clan