Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1233 ATGATGGTGACTGTGAATGAATTGGTGTATCTATCTGTATGTGTTCCTAGCAGGAAAGCTAAAGAACTGAAATGTGGTAAAGTGCTTGTCTTCATGGAAGAGTTAAATGACTTGTCTGTAAGAAAGTCTATCTCAAACAGAAGCCACCACTGCCTAACTACAAGATCTGCATGGAAACAGAAGAAAATGGTTCAACAGGAATTCCGGAAAGGTCCATGGACAGAACAGGAGGACATCAAATTGGTCTCGTTTGTTGGCTTGTTTGGAGACCGGAGGTGGGATTTTATAGCCAAAGTTTCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACTTGCATCCTGGTCTCAAAAGGGGCAAGATGACGCCCCAAGAAGAGCGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATCAAGAATTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAGACAAAGCGGGCTGCCACCCCATCATCAACATCTAATTGTCATTTTTCAATGTCATCAAATAATCGAGCGGTGGGTTCACATCCTTCCAAAGAGAGTGGAGAAGAAAGCTTTTATGATACAGGAGGGCCTAATATGATCGACTCAACAGAAATCAAGATAGGGGGAGAACAAGGTGAACAGTGTTACTCCATGGATGACGTATGGAAGGATATTGCTCTGTCAGAAGAGAATGTTCAGAATCCAGTCCATGCTAGTGTTAGGCGTATCGAAGAGGATTACAAATTCTTTTGTCGTCATCTGCCATCTCCTTCTTGGGAGTATTCTTCAAACTCGCTGTGGGTTATGGAGGAAGAAGAAAGTAAGACGTTTCTCCCTTCAAGTGATCAGCAATTCTTTTCCAGTTTCGAACAAGGGCCAGCATTTCTAACTGGCTAA 957 0.4389 MMVTVNELVYLSVCVPSRKAKELKCGKVLVFMEELNDLSVRKSISNRSHHCLTTRSAWKQKKMVQQEFRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRAATPSSTSNCHFSMSSNNRAVGSHPSKESGEESFYDTGGPNMIDSTEIKIGGEQGEQCYSMDDVWKDIALSEENVQNPVHASVRRIEEDYKFFCRHLPSPSWEYSSNSLWVMEEEESKTFLPSSDQQFFSSFEQGPAFLTG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1233 318 SMART sant 69 119 IPR001005 -
Lele09g1233 318 SMART sant 122 170 IPR001005 -
Lele09g1233 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 172 IPR017930 -
Lele09g1233 318 MobiDBLite consensus disorder prediction 177 201 - -
Lele09g1233 318 MobiDBLite consensus disorder prediction 175 217 - -
Lele09g1233 318 Pfam Myb-like DNA-binding domain 123 167 IPR001005 -
Lele09g1233 318 Pfam Myb-like DNA-binding domain 70 117 IPR001005 -
Lele09g1233 318 SUPERFAMILY Homeodomain-like 68 164 IPR009057 -
Lele09g1233 318 Gene3D - 126 171 - -
Lele09g1233 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 117 IPR017930 -
Lele09g1233 318 ProSiteProfiles Myb-like domain profile. 65 117 IPR001005 -
Lele09g1233 318 FunFam MYB transcription factor 125 190 - -
Lele09g1233 318 ProSiteProfiles Myb-like domain profile. 118 168 IPR001005 -
Lele09g1233 318 Gene3D - 70 122 - -
Lele09g1233 318 FunFam Myb transcription factor 70 122 - -
Lele09g1233 318 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 64 198 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele09g1233 318 CDD SANT 125 168 IPR001005 -
Lele09g1233 318 CDD SANT 72 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1233 Lele-ChrLele09 21206318 21208880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1233 62 316 MYB Transcription Factor Family AT5G59780 58.687 8.84e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g1233 Myb_DNA-binding 9.6e-15 CL0123