Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1228 ATGAATGTCTTTATTCACCGATTCTCTGAGAGTGTTGTGGTACTTGAGCTTGCATTTGGCTGCTGTATTGTGCTTAACTTTTTCTTTCATATAAACGTAATGCGTTGGATACCCAATTGGATTGCCTTCAAGTTCATATACTCAAATGGAGATTTATACAATGTATCTTCCCTGTCATTTAATGTTGTTGGTGCCTTTGTCTTACAGAACTTCAGCAGGTTAATGTTTTCTATCTATTTTGCCTTCAGGGTTTCAGGAAGTTTTGACGGACGGGTCAAGTTTCTTTTTTGTTTATCCATGGCGCCTAAAGGTGATAGTTCAAAGAAGACTGACCCAAAGGCACAGGCCTTGAAAACTGCCAAGGCAGTAAAATCAGGCCCCACTTTCAAGAAGAAGGCCAAGAAAATTAGAACATCAGTCACATTCCATCGACCCAAGACATTGAAAAAGGATAGAAACCCTAAGTACCCTCGTATCAGTGCTCCAGGAAGAAATAAGCTTGATCATTATCAAATTCTGAAGTATCCTCTCACCACCGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACTTGCGTGCAGACAAGAAGAAGATAAAGGATGCTGTGAAGAAAATGTACGACATTCAGGCCAAGAAAGTAAACACTTTGATCAGGCCCGACGGTACCAAGAAGGCCTATGTCAGGTTGACTCCCGATTATGATGCCTTGGATGTCGCCAACAAGATTGGAATCATCTAA 759 0.4071 MNVFIHRFSESVVVLELAFGCCIVLNFFFHINVMRWIPNWIAFKFIYSNGDLYNVSSLSFNVVGAFVLQNFSRLMFSIYFAFRVSGSFDGRVKFLFCLSMAPKGDSSKKTDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPGRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1228 252 TIGRFAM uL23_arch: ribosomal protein uL23 176 252 IPR019985 GO:0003735|GO:0005840|GO:0006412
Lele09g1228 252 Pfam Ribosomal protein L23, N-terminal domain 113 162 IPR005633 -
Lele09g1228 252 Gene3D - 133 252 IPR012677 -
Lele09g1228 252 ProSitePatterns Ribosomal protein L23 signature. 230 245 IPR001014 GO:0019843
Lele09g1228 252 FunFam 60S ribosomal protein L23a 132 252 - -
Lele09g1228 252 Hamap 50S ribosomal protein L23 [rplW]. 172 252 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lele09g1228 252 PANTHER 60S RIBOSOMAL PROTEIN L23A 105 252 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lele09g1228 252 Pfam Ribosomal protein L23 172 234 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lele09g1228 252 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 169 245 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1228 Lele-ChrLele09 21185551 21188836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1228 125 252 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 89.844 9.91e-65 197