Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1222 ATGGGTTTCTTCGACCTAAATATTCCGTACCTAGAACCCTCGCCGACTGAGAAGGCCACTCTCGAAAGGCAACGCACAAAGATTGTTGTCAAGGCTATGGAGAATCTCATCGGCTGCCCCGTTCCGTCAGTATACGCGGCTTACAGTTTGCATGGACAAGTCCTCAATTCGGGAAATCCCATTTTGAAGACCTACGATTTGGTGGCCGTTAGGCCATTGAATCAGACTGTGTTTGATCAAGCTTGTGAGAGAATGGAGGTAGATATCATTTCCATGGATTTCTCTGGCAAGGTGCCCTTTAGATTGAAGCAGCCTATGGTCAAAGCAGCAGTTGAGTTGTTGGTGGATTGGACTCGAGGAAGAAACATCATATTATCAAGTGCTGCTCCTTCTGCTAATGAACTTAGAGGGCCTTGTGATGTTGCTAATTTGTCGTCATTGCTTGGGCTTTCTAAGGAGAAAGCTAAAGCTGCTATTTCTAAAAATTGTAGGACTCTTTTAACAAATTCTTTGAGTAAAAAGCAATATTACAAGGGGACAATAAAAGTAGAAGTTGCACCATCTGGTGCAGCATCTAAGTCCGAAGAAGCTTGGCATAAAGAATTACTTCAGTGGGATCCTATCTCCAGTGGTGAAGGTGATCTGCTGTTGGATGACATGGCCAAGTCATTTTCTTTATCTTGTAATAATGCATCAAAAACTACAAAAGCCATTGGCTTTGCTTCTGCAATTGGCAGTATACCTTCTCATGGTTTTCAAGTCAGGGATTTCTTATTTGCTAGTAATTCTGCCCCTACCTTCCTAGATAATAATGATAATTCCCTGCATGTTACTGAAAAAGTAACTCCATCAACAGATTTGCTTAACAACCCAATAAATGCATCTCAACTGTACACGTCTTTAGCAGATGCCAAACTAGAGGACGCACACCATATCAATGGGATTGCCAAGATTCTGGAAGCTTTACCAAAGCAGGATATTGTAATAGGAGAGCTTACAGCCTTGGAGATGAACCAATCTATATGTGAAACTTCGATGGTGGATGAACAATTTAAAAGACATGAATCTGAAGCAGTTGAACTTAGTGAGATGTCTGAGAAAACATCTCATGAGGTAAAAATGGAAGATGATTATTCAGTTGCAACACAAATAACAACGGATATTACTATGGAAGATCAAAGTCATGTGCAAGGTTGCACTTACTCTCATCGGCATGGCAAGGTCCGGTCTATGCCAGGTCATAAGTAA 1248 0.4135 MGFFDLNIPYLEPSPTEKATLERQRTKIVVKAMENLIGCPVPSVYAAYSLHGQVLNSGNPILKTYDLVAVRPLNQTVFDQACERMEVDIISMDFSGKVPFRLKQPMVKAAVELLVDWTRGRNIILSSAAPSANELRGPCDVANLSSLLGLSKEKAKAAISKNCRTLLTNSLSKKQYYKGTIKVEVAPSGAASKSEEAWHKELLQWDPISSGEGDLLLDDMAKSFSLSCNNASKTTKAIGFASAIGSIPSHGFQVRDFLFASNSAPTFLDNNDNSLHVTEKVTPSTDLLNNPINASQLYTSLADAKLEDAHHINGIAKILEALPKQDIVIGELTALEMNQSICETSMVDEQFKRHESEAVELSEMSEKTSHEVKMEDDYSVATQITTDITMEDQSHVQGCTYSHRHGKVRSMPGHK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1222 415 Gene3D - 114 170 - -
Lele09g1222 415 PANTHER RIBONUCLEASE P SUBUNIT P30 112 311 IPR002738 GO:0008033
Lele09g1222 415 Gene3D - 49 113 - -
Lele09g1222 415 Pfam RNase P subunit p30 59 112 IPR002738 GO:0008033
Lele09g1222 415 Pfam RNase P subunit p30 114 162 IPR002738 GO:0008033
Lele09g1222 415 SUPERFAMILY PHP domain-like 61 167 IPR016195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1222 Lele-ChrLele09 21113395 21116350 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1222 09 21113395 21116350 Lele29g0181 29 1018552 1022318 CCT
Lele09g1222 09 21113395 21116350 Lele30g1226 30 14990167 14993869 CCT
Lele09g1222 09 21113395 21116350 Lele31g1372 31 19554612 19558379 CCT
Lele09g1222 09 21113395 21116350 Lele32g0170 32 983394 988508 CCT
Lele09g1222 09 21113395 21116350 Lele11g1222 11 19318727 19320237 hybridization
Lele09g1222 09 21113395 21116350 Lele12g0099 12 835490 838758 hybridization