Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1220 ATGGAGCAATCGGAAAAAACAGCAAAGCAATCATCGAAAAGGTCGTCATTTCCGAGAGACCCTCGTGGTTCGCTTGAAGTGTTCGACCCTTCTTCCTACTCAACGGATAGTCCATCAGACTCGCCGTTCCGATCTCAGCCAAAGTGGAAAACTTGGATCGAGTCACCAACCTCCGCCACTCACAAGGATGAAATCACCAGCACATCATGGATGGCGCTTAAGGACTCCGATAGTCCACCGCCGCAGACTCTGTCCGCCATTCTACACGAGCGACCTGAGCTGACCCCGAAATCTCCGTCCGCCGTGGCAGGAGACTTAGGCGCGGCGGCGCAGAGAGCCGCTGAGTGGGGATTGGTGCTGAAGACTGACACGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGAGAGGAACCAAATTCGAAGATCTCGGGTACTTCGAGAAGGAACTCAAACAACTCGGTGAGAAGCTCCGGCGAATTGTCGGACGACGGAGGAAAAGAAACACGGGGATTCCCGAGAGTTTCAGAGGATCTGAAGGATGCTCTGTCGGTGTTCCAACAGACTTTCGTGGTCTCGGATGCTACCAAACCCGATTATCCGATCATGTATGCGAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCCAAGGAGGTCATCGGGAGGAACTGTCGGTTTTTACAGGGCGCGGATACGGATCCAGAGGACGTGGCAAAGATAAGGGAGGCGCTGCAAGCAGGGACGAGTTACTGCGGAAGATTACTGAATTACAAGAAGGATGGCACTACTTTCTGGAACCTTCTCACTATTTCCCCCATCAAGGACGACGATGGCCAAGTCCTAAAATTCATTGGAATGCTAGTGGAGGTTAGCAAGCATACCGAGGGGTCCAAGGAGAAGACGCTACGTCCTAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCTTCCACAGTAACTGAGTTAGTGAAGGCAGTGAAGCGCCCCCGAGCATTAAGTGAATCAGGAAAGCGTCCATTGATCAGAAAATCTTTAGGTGATGAACAACAAAGAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTGCATTACGACCAAAACCACATGGGGGCCATCGAAACTCAATGCAGCAAATCAATGAGCTCCCTCAAAAGAAGCAGAAAAGTCGCCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAATGATGAAAGCGTTGAGGACAATGAAGTTGTGGAGGGCAGCTCCGAGAGTGAGGAAGAAGATGAGAGGCCCGATAGCATTGATGACAACAAACTAGCGCAAAGGGAGAAGCGAAAGGGTCTTGATCTCGCGACGACACTTGAACGGATTGAGAAGAACTTTGTCATTACCGATCCAAGATTGCCTGATAATCCCATCATCTTCGCTTCTGATAGTTTCCTAGAACTTACAGAATACAGCCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAGCCAAACAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGATCACAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGGCAAAGGAGGGAGAACAGTTGGTTAAAAAAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCCAATTTGAAACCAGAAGATTTATGGTTAAATCACTCAAAAGTGGTCCATCCAAAACCTCATAGGAAGGATAACCCTGCTTGGGGAGCTATCCTGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAGGCCAGTCAAACCCTTGGGATCTGGGGACACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTAGCCAATATTTCGCCATGAAGGCAATGGATAAATGTGTTATGCTAAATCGAAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTTCCAGCATTATATGCTTCATTTCAGACCAAAACGCACATTTGCCTGATAACTGATTATTGTCCCGGTGGAGAACTGTTCCTGCTTCTCGACCGGCAGCCAACGAAAGTTATCAAAGAAGATGCAGCAAGGTTTTATGCTGCTGAGGTTGTCGTTGCACTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTCCAGAGTAATGGGCATGTGTCTCTGACAGATTTTGACTTGTCATGTTTAACATCCAGCATACCACAGCTTTTGATTCCACCTTCAAAAGAAAAGAAGAAACACAAAGGGCAGCAGGCTCCAATATTCGTGGCCGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACCAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATACGAAATGATGAATGGATATACACCATTCAGGGGGAAGACAAGGCAAAAAACATTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCAAAGCAGTTGATTAACCGGTTGTTGCACAGAGATCCCAAAAACCGATTGGGTTCACAGGAAGGAGCAAACGAAATAAAGCGTCACCCATTCTTCAAAGGTGTCAATTGGGCCCTCGTTCGTACTATGAACCCTCCTGACCTGGACGCTCCTCTCTTCGGGGCAACTGAAGAAGAGAAGGAAGTCAGAATTGTTGATCCTGCGATGGAGGAACTACAAACAGATTTTTTCTGA 2964 0.4652 MEQSEKTAKQSSKRSSFPRDPRGSLEVFDPSSYSTDSPSDSPFRSQPKWKTWIESPTSATHKDEITSTSWMALKDSDSPPPQTLSAILHERPELTPKSPSAVAGDLGAAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEEPNSKISGTSRRNSNNSVRSSGELSDDGGKETRGFPRVSEDLKDALSVFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTTFWNLLTISPIKDDDGQVLKFIGMLVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSTVTELVKAVKRPRALSESGKRPLIRKSLGDEQQRVESLPRRKSESVAALRPKPHGGHRNSMQQINELPQKKQKSRRRSFMGFIKKSQPNDESVEDNEVVEGSSESEEEDERPDSIDDNKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDSQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGEQLVKKTAENVDEAVRELPDANLKPEDLWLNHSKVVHPKPHRKDNPAWGAILKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTSQYFAMKAMDKCVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSIPQLLIPPSKEKKKHKGQQAPIFVAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMNGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLINRLLHRDPKNRLGSQEGANEIKRHPFFKGVNWALVRTMNPPDLDAPLFGATEEEKEVRIVDPAMEELQTDFF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1220 987 FunFam Putative LOV domain-containing protein 192 348 - -
Lele09g1220 987 Pfam PAS domain 478 570 IPR000014 -
Lele09g1220 987 Pfam PAS domain 199 295 IPR000014 -
Lele09g1220 987 ProSiteProfiles PAS repeat profile. 455 528 IPR000014 -
Lele09g1220 987 MobiDBLite consensus disorder prediction 140 163 - -
Lele09g1220 987 CDD STKc_phototropin_like 654 961 - -
Lele09g1220 987 MobiDBLite consensus disorder prediction 1 20 - -
Lele09g1220 987 FunFam LOV domain-containing protein 655 739 - -
Lele09g1220 987 SUPERFAMILY PYP-like sensor domain (PAS domain) 471 570 IPR035965 -
Lele09g1220 987 ProSiteProfiles PAS repeat profile. 178 249 IPR000014 -
Lele09g1220 987 FunFam LOV domain-containing protein 444 608 - -
Lele09g1220 987 CDD PAS 205 294 IPR000014 -
Lele09g1220 987 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Lele09g1220 987 MobiDBLite consensus disorder prediction 1 106 - -
Lele09g1220 987 ProSiteProfiles PAC domain profile. 529 583 IPR000700 -
Lele09g1220 987 Gene3D PAS domain 444 608 - -
Lele09g1220 987 PANTHER FLIPPASE KINASE 1-RELATED 161 960 - -
Lele09g1220 987 TIGRFAM sensory_box: PAS domain S-box protein 480 570 IPR000014 -
Lele09g1220 987 TIGRFAM sensory_box: PAS domain S-box protein 205 299 IPR000014 -
Lele09g1220 987 SMART pas_2 180 249 IPR000014 -
Lele09g1220 987 SMART pas_2 457 526 IPR000014 -
Lele09g1220 987 SUPERFAMILY PYP-like sensor domain (PAS domain) 199 291 IPR035965 -
Lele09g1220 987 FunFam Putative LOV domain-containing protein 740 954 - -
Lele09g1220 987 MobiDBLite consensus disorder prediction 421 441 - -
Lele09g1220 987 SMART serkin_6 656 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1220 987 MobiDBLite consensus disorder prediction 337 450 - -
Lele09g1220 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Lele09g1220 987 SMART pac_2 532 574 IPR001610 -
Lele09g1220 987 SMART pac_2 255 297 IPR001610 -
Lele09g1220 987 Coils Coil 587 607 - -
Lele09g1220 987 SUPERFAMILY Protein kinase-like (PK-like) 641 961 IPR011009 -
Lele09g1220 987 Pfam Protein kinase domain 659 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1220 987 CDD PAS 470 570 IPR000014 -
Lele09g1220 987 Gene3D Transferase(Phosphotransferase) domain 1 740 954 - -
Lele09g1220 987 Gene3D PAS domain 192 350 - -
Lele09g1220 987 ProSitePatterns Protein kinases ATP-binding region signature. 662 685 IPR017441 GO:0005524
Lele09g1220 987 MobiDBLite consensus disorder prediction 28 83 - -
Lele09g1220 987 MobiDBLite consensus disorder prediction 338 376 - -
Lele09g1220 987 ProSiteProfiles PAC domain profile. 252 306 IPR000700 -
Lele09g1220 987 ProSiteProfiles Protein kinase domain profile. 656 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1220 987 MobiDBLite consensus disorder prediction 121 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1220 Lele-ChrLele09 21095619 21104795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1220 1 987 AGC Kinase Gene Family AT3G45780 70.432 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele09g1220 Pkinase 1.1e-64 CL0016