Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1212 ATGTTCGATCTTAATCTGAATGCCGATTCGCCTGATACCTTTCATAACGATGAGTCCATAAGGTTATCCGACGAGATAATGGAAGCCTCCGGGAATCAAATGGCGAAATCGGGGACTTCCAATTCCTCTAATGTCTATGCTGACGGATCCAGCAATGGAGGACACGAGGACTCCTGCTCTACACGCGGTGGGGACGCCTTCACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGTGAAAGAAGTCGCAAACAGGGAGCTATTTCTGTTTAGTGAAACTAAAGGAGTGGACGGCGAGTCTGCAAATTGGCAAGGTCAGTCTTTGTCTGCCCTTCCATCGAGAAAGAGCTGGATGAGTCTTTCCTTTGATCATCAGGATGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGCAACAACCTCAACAGCAAGTGAAGAAAAGCAGAAGGGGTCCAAGGTCTCGGAGCTCGCAGTTCCGAGGGGTAACCTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGGTTTGATACAGCTCATGCCGCTGCCAGGGCCTACGATCGTGCTGCTATTAAGTTTAGGGGAGTCGATGCTGACATCAATTTCAATCTTAATGATTACGAGGAGGATCTTAAGCAGGTATATATATCTTGGGCTATTCGACAACGAAGTGGCAGTCACAATCTTGACCTCAATTTGGGCATAGCAACACCAGGCAGTGGTCCAGAAGAAAATAGGGGCCATCAGTTACAACCTATTCCTTACAACATGCATACTGGAAGAAGTTCAAGGTTTTTCTCTTTGGGAAGTCATATTTCTAGCATTGAGATCCTAATAAGGATGGGTTCTCTTAATCTGCAGAATGAGATCAATGTTGATCCATCGTTGAATAGGCCAGTTGTCACTGAGGAGCGTCCTTTTGTATGGAATGGCATCTATCCTAGTTTCTTTCCCAATGAGGTGAATTTCATTGTCTGGTATATAGATTTACAATCAGAGCATTATTCTTGTATCTCAGTAAACAACCGTGACATTGATTTTCTCGCTAGCGTCTTAGAACAGTTAAGAATGCTTTCTTTGGAAGCGGCACTACAAATGAACATTGACTTGTATGTTTGGAAGTTCTACATATTGAATATTTGTGAAAGGGTTGAGAGAATCAGTAGAGATCATTCACAGGGACTGCCTCAGTGGGGTTGGCAAACGCAAGGCCAGGTTACTGCGACGCCAGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCGGCTACCTTTCCATTGGCTACCATCTATAGCTCAATTCCCCATCATATCTGTTTTGACCCATCTAGTGCAGCAGCTGGCAGCAACACACCTCAACATTGCCGGATGAAGTCCCCGCACGCACCCCACTAG 1434 0.4561 MFDLNLNADSPDTFHNDESIRLSDEIMEASGNQMAKSGTSNSSNVYADGSSNGGHEDSCSTRGGDAFTFNFDILKEEGVKEVANRELFLFSETKGVDGESANWQGQSLSALPSRKSWMSLSFDHQDGNGEMKMVQVQQQPQQQVKKSRRGPRSRSSQFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQVYISWAIRQRSGSHNLDLNLGIATPGSGPEENRGHQLQPIPYNMHTGRSSRFFSLGSHISSIEILIRMGSLNLQNEINVDPSLNRPVVTEERPFVWNGIYPSFFPNEVNFIVWYIDLQSEHYSCISVNNRDIDFLASVLEQLRMLSLEAALQMNIDLYVWKFYILNICERVERISRDHSQGLPQWGWQTQGQVTATPVPPFSTAASSGFSISATFPLATIYSSIPHHICFDPSSAAAGSNTPQHCRMKSPHAPH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1212 477 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Lele09g1212 477 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Lele09g1212 477 MobiDBLite consensus disorder prediction 31 59 - -
Lele09g1212 477 MobiDBLite consensus disorder prediction 31 58 - -
Lele09g1212 477 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Lele09g1212 477 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 125 223 - -
Lele09g1212 477 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Lele09g1212 477 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Lele09g1212 477 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Lele09g1212 477 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1212 Lele-ChrLele09 21039633 21043155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1212 1 224 AP2-EREBP Transcription Factor Family AT2G28550 57.143 2.82e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele09g1212 AP2 1.2e-09 CL0081