Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1209 ATGGTCCGAATTGCGTGGCACTCGGCTGGGACCTATGACGTGAAGACTAAGACCGGCGGTCCCTTTGGTACCATGAAGCACCCTGCTGAACTTGCTCACGGGGCTAACAACGGGCTTGATATTGCCGTTCGGCTGTTGGAGCCCATCAAGGAACAGAGTCCCATCTTGACCTACGGTGATTTCTACCAGCTGGCTGGTGTAGTCGCTGTTGAGGTTACTGGTGGGCCCGAAATTCCTTTCCACCCAGGAAGAGAGGACAAGCCAGAGCCACCTCCTGAGGGCCGCTTGCCTGATGCCACAAAGGGTTCTGATCATCTGAGGGATGTGTTTGGCCATATGGGGCTTAGCGATCAAGATATTGTTGCTCTCTCCGGTGCTCACACCCTTGGAAGGTGCCACAAGGAACGTTCTGGATTTGAGGGTGCCTGGACTTCCAACCCTCTGATTTTTGACAACTCGTACTTCAAGGAACTGTTGTCTGGTGAGAAAGAAGGCCTCCTGCAGTTGCCATCTGACCAAGCACTCCTCCATGACCCAGTATTCCGCCCTCTGGTCGAGAAATATGCAGCGGATGAAGATGCCTTTTTTGCTGATTATGCCGAGGCACATCTAAAACTCTCTGAACTTGGGTTTGCTGATGCATAA 645 0.5256 MVRIAWHSAGTYDVKTKTGGPFGTMKHPAELAHGANNGLDIAVRLLEPIKEQSPILTYGDFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGHMGLSDQDIVALSGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLPSDQALLHDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFADA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1209 214 Pfam Peroxidase 1 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 SUPERFAMILY Heme-dependent peroxidases 1 212 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 Gene3D - 1 210 - -
Lele09g1209 214 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 210 IPR044831 GO:0004601|GO:0034599
Lele09g1209 214 MobiDBLite consensus disorder prediction 80 103 - -
Lele09g1209 214 CDD ascorbate_peroxidase 1 214 - -
Lele09g1209 214 FunFam Cytosolic ascorbate peroxidase 1 103 - -
Lele09g1209 214 FunFam L-ascorbate peroxidase, cytosolic 97 203 - -
Lele09g1209 214 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 95 112 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 16 26 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 135 159 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 30 54 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 113 134 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 55 73 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 74 86 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Plant ascorbate peroxidase signature 187 211 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Haem peroxidase superfamily signature 74 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Haem peroxidase superfamily signature 143 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele09g1209 214 Gene3D Peroxidase, domain 2 97 203 - -
Lele09g1209 214 MobiDBLite consensus disorder prediction 76 103 - -
Lele09g1209 214 ProSiteProfiles Plant heme peroxidase family profile. 39 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1209 Lele-ChrLele09 21031656 21033613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1209 38 206 Peroxidase AT4G16270 30.952 8.85e-19 81.6