Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1206 ATGTATCCCCCTTGGATATTGGAGAAGTTTTCAGATCTGAAGCCAAAATCCATTTTCATCATGGTTTCCTCGAAAATGGAACAGTTCATTGATAACATGCCGCCAATGGATCTGATGCGTTCGGAGAAGATGACCTTCGTTCAACTCATCATCCCCGTCGAGTCCGCTCACCGTGCCGTCACTTATTTGGGCGAACTCGGCCTCTTCCAATTCCAAGATTTAAATGATGATAAAAGCGCTTTCCAGAGAACGTTTGTTAATCAGGTCAAGCGATGTGCGGAAATGTCGAGAAAGTTACGATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTTATGCCTTCTCCTCATCCTGTTTTGCAACCAGATATTGAGTTGGAGGAACTAGAGTATAAACTTGCTGAGCATGAACATGAGCTAATTGAACTGAACTCTAACAGCGAGAAACTTCGTCAGTCATATAATGAGCTCCTGGAGTTTAAGATTGTTTTGCAGAAGGCATTTAGTTTTCTAGCCTCAAATCATAGCCATGAATTTTCAGAGAGGGAGCTGGAGGAGAATGTATACTCAAATGATGATCATGTTGACACTGGATCTATACTTGAGAAGGATTTGAAGCCTGGATCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGGGCTACAAGAGGTAATATGCTTTTCAATCAGGCTGCAGTTGATGAGCTAATCGAGGATCCTGTTTCAAATGAGAAGATAGAGAAAACAGTGTATGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAATAAAGATTCTTAAAATCTGTGAGGCATTTGGTGCAAATTGCTACCCTGTCCCTGAAGATATAAGTAAACAAAGACAAATAAGTAGGGAGGTCTCATCACGTCTTTCTGACTTAGAGGTGACTCTGGATGCTGGTCTTAGGCACCGAAATAAGGCCCTTTCTTCTGTGGAGAGTCACCTAGCAAAATGGATGGACATGATAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGACGTCACAAAAAAATGTCTCGTTGGAGAGGGTTGGTGCCCTGTATCTGCAACAACGCAGATTCAGGTGGCACTGCAGCGTGCAACTTTAGATAGCAGCTCTCAAGTTGGCATAATCTTCCACCCAATGGATGCAGTGGAATCACCACCCACATATTTTAGGACCAACCGCTTTACTAGTGCATATCAGGAAATTGTGGATGCATATGGTGTTGCGAGATACGAGGAAGCAAATCCTGCGGTTTACACAGTTATTACATTCCCATTTCTTTTTGCCGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGGGCATTTGTTCTTATAGCACGTGAAAGCAGGCTCAGTAAGCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGTTATGTGCTTCTTTTGATGTCTTTGTTTTCAATCTATTGCGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCATATTTTTGGAAAGTCTGCTTACACATGCCGAGATGCTTCGTGCAGGGATGCACATACTGCTGGCTTAGTCAAATCACGAGATACATACCCATTTGGTGTGGACCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTCGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCATTATTTTAGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTTCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCGTAAAGTGGTGCAATGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGGGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTGTGTTATTACTTTTGGCTTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTAAAGAAGCTCCACCATGAGAGATTCCAAGGACGTGCTTATGGTATGCTTACTAACACTGAGATGGACCTCGAGGAAGAACCAGATTCTGCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCATCAAATGATCCACTCTATTGAATTTGTTCTAGGCGCTGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACTGTTTTTTATGAGAAAGTACTACTTCTTGCTTGGGGGTATGACAATCTTGTTATTCGGATAGTGGGGCTAGTCGTTTTTGCCTTTGCAACTGCCTTTATTCTTCTGATGATGGAAACCCTTAGCGCTTTTCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACTATGGCGATGGCTACAAGTTCAGACCTTTTTCCTTTCCCTCGTTAACGGAGGATGATGATTGA 2532 0.4206 MYPPWILEKFSDLKPKSIFIMVSSKMEQFIDNMPPMDLMRSEKMTFVQLIIPVESAHRAVTYLGELGLFQFQDLNDDKSAFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMPSPHPVLQPDIELEELEYKLAEHEHELIELNSNSEKLRQSYNELLEFKIVLQKAFSFLASNHSHEFSERELEENVYSNDDHVDTGSILEKDLKPGSSYQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAAVDELIEDPVSNEKIEKTVYVVFFSGEQARIKILKICEAFGANCYPVPEDISKQRQISREVSSRLSDLEVTLDAGLRHRNKALSSVESHLAKWMDMIRREKAVYDTLNMLNFDVTKKCLVGEGWCPVSATTQIQVALQRATLDSSSQVGIIFHPMDAVESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGAFVLIARESRLSKQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGKSAYTCRDASCRDAHTAGLVKSRDTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNAHYFSSSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCNGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRAYGMLTNTEMDLEEEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRIVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYYGDGYKFRPFSFPSLTEDDD 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1206 843 Coils Coil 125 152 - -
Lele09g1206 843 Pfam V-type ATPase 116kDa subunit family 62 835 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele09g1206 843 PANTHER VACUOLAR PROTON ATPASES 38 842 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele09g1206 843 PIRSF ATP6V0A1 34 843 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1206 Lele-ChrLele09 21005612 21020279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1206 26 835 Primary Pumps ATPases(2) AT2G28520 77.396 0.0 1308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1206 09 21005612 21020279 Lele29g0196 29 1133171 1143880 CCT
Lele09g1206 09 21005612 21020279 Lele30g1209 30 14837965 14849850 CCT
Lele09g1206 09 21005612 21020279 Lele31g1356 31 19435391 19441336 CCT
Lele09g1206 09 21005612 21020279 Lele32g0186 32 1115839 1122093 CCT
Lele09g1206 09 21005612 21020279 Lele11g1208 11 19201607 19210665 hybridization