Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1205 ATGTCTAACCAATCACTGGAGAACATGATAGCTTGTTCAAAAGCTCAGCAGCAAGAAAGGAAGCCGAGACCTCAACCAGAAGAAGCACTGAAATGCCCAAGATGTGACTCGACCAACACCAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATACTTCTGCAAGTCCTGCAGAAGATATTGGACCAAAGGAGGAACATTGAGAAATGTTCCAGTGGGTGGAGGCTGCAGGAAGAACAAGAGGTCTTCTTCATCAAAGAGAGCTCAAGATCAACCACTCAACGCCCACCACCACAACAACCCACTCGCCACCATCCCTTCATTATCTTATGATTCTAATGATCTCACCCTCGCATTAGTTCGGCTCCAAAAGCAATCTACTGGGCAATTGGGTTTTGATGATCACCATGATCTTTCAATTCTGGGGAATCCAACAAGCTCCCATTTTGATATTCTTGGCAACACCACAAATCCTGGGTTTTTAGATGCATTTCGAAGTGGATTCGTGGAAACCCATCATCAGCAGAACAATAATTTGCAGAATCTGTATTGTGGATATGGAAATGGTGACATGGGAGAGGTGCTGGACAATGGCAACAACCCAGAGATGATGCTTCCTTATGATCAAGAAATCAACAATGCACCCGCCACAAGACAAACAGCGTCGGTTACTACTATGAAGCACGAAATAATGTGTAATGCCAGAGAACAAAGTGAAAACAAGGTTTTATGGGGTCTTCCATGGCAGTTCAATGGGGACATAAACATGGGAGGGATCGATTCAGGAAGAGCAAGTTGGAACAACAATGGTATCGGTTCATCTTGGCACGGTCTTCTCAATAGTCCCCTAATGTAG 864 0.4421 MSNQSLENMIACSKAQQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRAQDQPLNAHHHNNPLATIPSLSYDSNDLTLALVRLQKQSTGQLGFDDHHDLSILGNPTSSHFDILGNTTNPGFLDAFRSGFVETHHQQNNNLQNLYCGYGNGDMGEVLDNGNNPEMMLPYDQEINNAPATRQTASVTTMKHEIMCNAREQSENKVLWGLPWQFNGDINMGGIDSGRASWNNNGIGSSWHGLLNSPLM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1205 287 MobiDBLite consensus disorder prediction 75 104 - -
Lele09g1205 287 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Lele09g1205 287 MobiDBLite consensus disorder prediction 1 19 - -
Lele09g1205 287 MobiDBLite consensus disorder prediction 1 30 - -
Lele09g1205 287 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Lele09g1205 287 MobiDBLite consensus disorder prediction 89 104 - -
Lele09g1205 287 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 195 IPR045174 GO:0003700|GO:0006355
Lele09g1205 287 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1205 Lele-ChrLele09 20992685 20993548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1205 28 287 C2C2-Dof Transcription Factor Family AT2G28510 43.253 7.21e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele09g1205 zf-Dof 4.5e-34 No_clan