Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1201 ATGGAGAGCAGTGACGCAAACACTCCGCTTTCACAATCCCCCACTAATTCCTCCTCTTCCCCTTCTCCCACCCCTCAAGTCATCGCGAGCCCCTGCGCTGCTTGCAAGATTCTCCGGCGTCGATGTGCCGACAAATGCGTCTTGGCTCCCTATTTCCCTCCCACCGACCCTGCCAAGTTCACCATCGCCCACCGCGTCTTCGGCGCCAGCAACATCATCAAGTCCTTGCAGGAACTTCCGGAGAGTCAAAGAGCTGATGCGGTGAGCAGTATGGTGTACGAGGCGAGTGCGAGAATAAGAGACCCCATATATGGCAGTGCTGGTGCGATATGCCAACTTCAGAAGCAAGTGAATGAGCTCCAAGCACAACTTGCCAAGGCTCAAGCAGAGCTCGTCAACATGCAATTACAGCAAGCCAATCTGGTGGCTCTGATTTGCATGGAAATGTCTCAGACCCCTTTCAGTACTCCTCAGGAATCTGAATCGTCACAGCATTCCGTCGACAATTTCATTTCAACTCCTCCCCCCAACAACGCTTATCCGAGTAATCTCAACTTCTTCGACGACAACACTAGCTTTAACTCACTAGGGGAGCCTCTCTGGACATGA 609 0.5255 MESSDANTPLSQSPTNSSSSPSPTPQVIASPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKSLQELPESQRADAVSSMVYEASARIRDPIYGSAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMEMSQTPFSTPQESESSQHSVDNFISTPPPNNAYPSNLNFFDDNTSFNSLGEPLWT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1201 202 Coils Coil 110 137 - -
Lele09g1201 202 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Lele09g1201 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 164 - -
Lele09g1201 202 MobiDBLite consensus disorder prediction 154 174 - -
Lele09g1201 202 MobiDBLite consensus disorder prediction 1 26 - -
Lele09g1201 202 Pfam Lateral organ boundaries (LOB) domain 31 128 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1201 Lele-ChrLele09 20960676 20961386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1201 27 202 AS2 family AT2G28500 65.054 1.20e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele09g1201 LOB 3.6e-40 No_clan