Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1192 ATGGAAGGAGAATACCAAACCAGTGCTAAGTTTCCCCCTGGATTCAGATTCCATCCTTCTGACGAAGAACTCATCATTCATTACTTACAAAACAAAATCACCTCTCGTCCACTTCCAGCATTGATTATTGCAGAAATTGATCTGTACAAGTATAACCCATGGGAGTTACCCAAGAAGGCATTGTTTGGGGAGGATGAATGGTATTTCTTTAGCCCCAGAGACCGAAAGTACCCTAATGGATTAAGACCAAACAGAGCCGCAGCTTCAGGGTATTGGAAGGCCACTGGAACAGACAGGCCTATACTAAGCTCTTGTGGTTCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTCTTTTACACAGGTCGCCCTCCCAGAGGGGCTAAGACAGATTGGATTATGAATGAATACAGATTGGTTGACACTACCAGCAAACCTTCCAGGTTTAAAGGTTCCATGCGACTGGATGAGTGGGTGCTATGCCGGGTTCGACACAAAGGCTACTCATGGAAGAATTCTGGTGTGAATCAGGAGCATCACTTGCAGGCAAAGCTTCCAGGCTGCGAACAATTCCCAGGAAACACAGAACTTGAAGCTAACATCTTCACAAATTATCAGTACAGAGACTATCGAATCTTAGCTTCTATTCTTGTTGGCGAACCTGTACTTCCCATAGAGAACAAGTCAAGTGTTAGCTTTAAAGGCAGCAAGAGCGACAACCTCAATTCAACGTGTAACTACTTCGACACCTTTAGTACAAAATCTAACGAAGATTGTCAATACGAGAATCTCATTTCTTTTAACAGGGATCTTCACATTGAGAACAAAATTGATCATTTTACTGGCAAGGTGTTGACGAGTAGTGACACGTATTACTGCTATAGTCGAAATCAGTCTCAAGATGGCATCCTCAATGAGAATCCACCAGATCCTACCATCAATTTTGAACAACTTGACAAATTGACCTCCACAGGAAGATACTCTACGTTTCCTTATTCATACTTAAATTTATCTTCCGCTGCTTGCAACATGAGGATATAA 1038 0.4249 MEGEYQTSAKFPPGFRFHPSDEELIIHYLQNKITSRPLPALIIAEIDLYKYNPWELPKKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDRPILSSCGSKRIGVKKALVFYTGRPPRGAKTDWIMNEYRLVDTTSKPSRFKGSMRLDEWVLCRVRHKGYSWKNSGVNQEHHLQAKLPGCEQFPGNTELEANIFTNYQYRDYRILASILVGEPVLPIENKSSVSFKGSKSDNLNSTCNYFDTFSTKSNEDCQYENLISFNRDLHIENKIDHFTGKVLTSSDTYYCYSRNQSQDGILNENPPDPTINFEQLDKLTSTGRYSTFPYSYLNLSSAACNMRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1192 345 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Lele09g1192 345 FunFam NAC domain-containing protein 72-like 20 170 - -
Lele09g1192 345 SUPERFAMILY NAC domain 6 165 IPR036093 GO:0003677|GO:0006355
Lele09g1192 345 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Lele09g1192 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 248 - -
Lele09g1192 345 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1192 Lele-ChrLele09 20902621 20904592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1192 11 168 NAC Transcription Factor Family AT1G61110 68.072 8.29e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g1192 NAM 1e-37 No_clan