Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1170 ATGTTTTGGAAGCTCGCTTCTTCTGTCCCCTCTCCTGTGGAGGCAATATTAGACCAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAGTAATTCAAGAATGCAAGGCCTTAAACAGTCGCCTCATTAACTTGTTTCCTTTCATTGCCTGTGAGATTTTTACTTGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTGTATCCCAACTTTATAGATGTGATACAATGGTTGGTTGAGAGCAACCTGCTAGAGATTATCATTGATAAATTAAGCCCATCTAGTCCTCCTGAAGTTCATGCTAATGTAGCTGAAACATTGTGTACAATAACTCGAAATGCTTCATCTGCTCTAGCAACTAAACTTTCAAGCCCAAGTTTTGTGGCAAGAATTTTGGATCATGCTTTGGAATATTCACAATCAAAGTCTAGCCTCATTTCCTCTCTCTCTGTGTGTATTTCTTTGCTGGATTCCAAAAGATCTGCAAGCTCTTCTCCCCTTTTTCATTCTTTCCGAAGTCAGTGCATGTATGAGGCTCCAGTTCCTGTTAACCCAGAGACTATTGGTGCAATGCTTCAGAAAATTGGTGACTTGCTTAAGCTTTTGCATGTATCATCCGATGAAAATGTATTGCCTACAACGTATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTAAAGATAGTTGAGTTTATTGCTGTACTTTTGGAAGCTGGGAATGAATTGGCTGAAGTAGAATTGGTCAACTCAGGAATCATTCAACGAGTTATTGATCTTTTCTTTGAATATCCATTCAATAACTCATTACACCATCATGTAGAAAGTATAATACTGTCATGTTTGGAGAGCAAAACTGATGTCGTTGTCGCTTATCTTCTTCAAGAATGTGATATAATTGGAAAAGTTCTCCGAGCAGATAAAAATCCTGTTTTTTATAGTGATGGCGACCAGCCAACAGTAGCTGCTGCTGGCAAACAGACACCACGGGCAGGAAACATTGGACATATCACTCGATTTGCCAACAAACTTGTTAACCTGGCTCCTAACCAAAGCCGCATACAGGCCTTTCTTCAGGAAAACAACGAGTGGAATGAATGGCAAGCTACAGTTCTACAAGAGTGTAATGTGGTTGAGAATGTTCATCGTTGGGCTTGTGGACGACCCACTGTATTACAAGATAGGATGAGGGATAGTGATAATGATGACCTTCATAATAGAGACTACGATGTTGCAGCATTAGCCAATAATCTGAGCCAAGCTTTTAAATACAAAATTTATGGAAATGAGGATAATGAAGAGGACCATGGAGGGCATGGTCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCATCTCTAAGACTTGGTGATGATCAAGGAAGTAGCCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAAATGGTAATGCACCTGAGGGAACATCATCTGAGATGATGGATGAGATTAGCTTGAATGGAGCTACAAATGGTGGAAACAACAGTAGTGATGATGAGGTAGTGGTAGGGGAGGAAGAGGAATTGGCTGAAAGCAGAAATACCACAAATGACTCCTCTAACATGAGTACGAACTTCTTCAGTGGATCAAGCGACGGCAAATCAATGAATGGTGGCACTCTAAACTCGGAAAATGAGAAGGCAGGTGCTGCACATGATATGGGATTTTTCAGGTTTGAGGCATCTGAAAACGAGGACCTTTTTGGGGATAGGCCATTACCTGACTGGGTGGGATGGGCTGAACCATCAGATATGAAAGTTTCTGGTTCAAGCACAAATCCCTTTGTTGATCATGATGATTCTGATAGCAATCTATTCACTAAATCTCAATTAGGCACCCCCAGTTCTTGTTCACCTTCAAATGGGGAATTCCCACCTGCAAATGGTTTGCCAACCCGGGGAGGGGACTCGAGTCAAAGATCAGCGGCAGTACCCTCCCTTTTTGAAGGGGATGTTGAATTTGTTGGCGTGGAATTGGAAGGTACTGAGAAAGCTATGGAACAGGCTCTCAAAGAAGGAATAGTCGGGGAAGCAGGACCATTGAAAAGAAATGTTGTTCCGAAAGTGCCAGAAAAGGACTCCGAAGAGGGTGGACCCGGAATGAAGGAATTCAACGACGCAAATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA 2259 0.4214 MFWKLASSVPSPVEAILDQENFTLEELLDEEEVIQECKALNSRLINLFPFIACEIFTCEIDVILKTLVEEEEVLVRLVGADDHVYPNFIDVIQWLVESNLLEIIIDKLSPSSPPEVHANVAETLCTITRNASSALATKLSSPSFVARILDHALEYSQSKSSLISSLSVCISLLDSKRSASSSPLFHSFRSQCMYEAPVPVNPETIGAMLQKIGDLLKLLHVSSDENVLPTTYGELRPPLGKHRLKIVEFIAVLLEAGNELAEVELVNSGIIQRVIDLFFEYPFNNSLHHHVESIILSCLESKTDVVVAYLLQECDIIGKVLRADKNPVFYSDGDQPTVAAAGKQTPRAGNIGHITRFANKLVNLAPNQSRIQAFLQENNEWNEWQATVLQECNVVENVHRWACGRPTVLQDRMRDSDNDDLHNRDYDVAALANNLSQAFKYKIYGNEDNEEDHGGHGRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRNGNAPEGTSSEMMDEISLNGATNGGNNSSDDEVVVGEEEELAESRNTTNDSSNMSTNFFSGSSDGKSMNGGTLNSENEKAGAAHDMGFFRFEASENEDLFGDRPLPDWVGWAEPSDMKVSGSSTNPFVDHDDSDSNLFTKSQLGTPSSCSPSNGEFPPANGLPTRGGDSSQRSAAVPSLFEGDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVVPKVPEKDSEEGGPGMKEFNDANYWRVDQEVAVLE 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1170 752 MobiDBLite consensus disorder prediction 537 578 - -
Lele09g1170 752 MobiDBLite consensus disorder prediction 718 732 - -
Lele09g1170 752 MobiDBLite consensus disorder prediction 617 674 - -
Lele09g1170 752 Pfam SIT4 phosphatase-associated protein 263 397 IPR007587 GO:0019903|GO:0043666
Lele09g1170 752 Pfam SIT4 phosphatase-associated protein 72 259 IPR007587 GO:0019903|GO:0043666
Lele09g1170 752 MobiDBLite consensus disorder prediction 617 657 - -
Lele09g1170 752 MobiDBLite consensus disorder prediction 546 576 - -
Lele09g1170 752 SUPERFAMILY ARM repeat 88 301 IPR016024 -
Lele09g1170 752 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 47 IPR007587 GO:0019903|GO:0043666
Lele09g1170 752 MobiDBLite consensus disorder prediction 717 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1170 Lele-ChrLele09 20781131 20790113 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0230 29 1330317 1331904 Lele09g1170 09 20781131 20790113 CCT
Lele30g1180 30 14656876 14658931 Lele09g1170 09 20781131 20790113 CCT
Lele09g1170 09 20781131 20790113 Lele11g1173 11 18958216 18967432 hybridization
Lele09g1170 09 20781131 20790113 Lele12g0150 12 1145529 1153666 hybridization