Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1169 ATGAAGGAAGTTGAGAAGAGCTTGGATCCGCAAATCTGGCACGCGTGCGCCGGAGGTATGGTTCAAATGCCTCCGGTGAACTCCAAAGTCTTTTACTTTCCTCAGGGCCACGCCGAGCACGCTCAGGCCAACCTTAATTTCCCCCCTTCCTTAAGGATTCCACCGTTTATTCTTTGTCGCGTGGTATCGGTGAAATTCTTGGCCGACCCAGAAACTGATGAAGTTTTTGCCAATATAAGGTTGGTTCCTTTGAGAAATTCCGAGCTCGATTACAACGACGACGGGGTTACGGACGGTAATGGATCGGATAATTCAGAAAAATCGGCATCTTTTGCCAAGACATTAACCCAATCTGATGCGAACAATGGTGGGGGCTTCTCTGTTCCAAGGTACTGCGCAGAAACTATCTTCCCACTGCTGGATTACACCGCCGAGCCACCCGTTCAAACCGTTGCTGCCAAGGACGTTCATGGCGAAACCTGGAAATTCAGACATATATACCGGGGAACACCTCGTCGGCACTTACTAACCACTGGGTGGAGCACTTTCGTGAACCAAAAGAAACTCGTTGCTGGGGATTCTATTGTTTTCTTGAGGGCCGAAAACAGTGAACTCTGTGTCGGAATTCGCCGAGCAAAACGTGGCGGTTTTGGCAGCAGGATGCAAACCCCATCAGCCGGCTGGCGCGGTGTTGCCGGCGGAACTGGTGTGGGGCCTTGTGGGGGCTTCTCTTATTTCTTGAGAGAGGACTACAAATTACTGCCTAATGCTTGTGGGAATTCAAGCCCTGTAAGAGCAAAAGTGAGGCCTGAATCTGTGATGGAAGCTATGACACTGGCTGCTAGTGGTCAGGCATTTGAAGTAGTTTATTATCCTCGAGCTAGCACTCCAGAGTTTTGTATTAAAGCTGCATCTGTCAAGGCTGCAATGAGAACTCAATGGTACTGTGGCATGAGGTTCAAGATGCCCTTTGAGACCGAGGATTCTTCTAGAATCAGCTGGTTCATGGGGACCATTGCTTCTGTTCAGGTTGTCGATCCCGGGCGTTGGCCCAACTCCCCCTGGCGACTTCTTCAGGTTACTTGGGATGAACCAGATCTGCTGCAGAATGTGAAGCGTGTTAGCCCATGGTTGGTAGAATTGGTATCAAACATGCCGGTCGTTCATTTCACGCCTTTTTCTACGCCGAGGAAGAAGCTGCGGCTTCCACAGCACTCGGACTTCCCCCTTGACGGTCAATTTCCGATACCGACGTTTTCAGGCAACCCCCTTGGGCTGAGCAGCCCCTTGTGTTGTCTATCTGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGAATATCTCTTTCAGATCTCCACCTTAACAATAATAAACTACAGTTGGGGTTGCTTCCAACTAACATCCAGCAGCTTGATATACATCCTGGGATGTCCAATGGCAAGAAGGCAAACAACGGCGAGAACAGTGAAAGCTTGTCTTGCTTGCTAACCATGGGAAATTCTTGCAAGAGTTTGGAGAAATCTGATAATGTGAAGAGGCACCGGTTCTTGCTTTTTGGTCAACCAATACTCACTGAGCAACAAATTTCTCGAAGCTGTTCTAGCGATAAGTTGTCTCAGAATGTTACAGAAAAAGATTTGCCAGATGAAAATAGAGACAAGGCAAAGCTGAAATTGGGTGATTCACAATCTGGTCTTTCTCAGCAGTTCTCACCTGGGAAATCTTCTAATAGTGTTGAGTATTCTTGGCAACTAGGCTTCAATAACGGTCATTGCAAGGTTTTCATGGAATCCGAGGACGTGGGACGAACCCTTGACCTCTCGTGTCTCGGTTCTTATGAAGAACTCTACAGAAGACTGGCCAACATGTTTGGAATTGAAAGATCTACAATGTTGCGCCATGTAATCTACTATGATGCATCTGGTGCTGTTAAGCAAACTGGACTAGAACCCTTTAGTGACTTCATGAAAACAGCAAAAAGATTAACAATTCTGACCGATTCAGGCAGCAAAGAGTTTTAA 2034 0.4749 MKEVEKSLDPQIWHACAGGMVQMPPVNSKVFYFPQGHAEHAQANLNFPPSLRIPPFILCRVVSVKFLADPETDEVFANIRLVPLRNSELDYNDDGVTDGNGSDNSEKSASFAKTLTQSDANNGGGFSVPRYCAETIFPLLDYTAEPPVQTVAAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENSELCVGIRRAKRGGFGSRMQTPSAGWRGVAGGTGVGPCGGFSYFLREDYKLLPNACGNSSPVRAKVRPESVMEAMTLAASGQAFEVVYYPRASTPEFCIKAASVKAAMRTQWYCGMRFKMPFETEDSSRISWFMGTIASVQVVDPGRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVVHFTPFSTPRKKLRLPQHSDFPLDGQFPIPTFSGNPLGLSSPLCCLSDNAPAGIQGARHAQFGISLSDLHLNNNKLQLGLLPTNIQQLDIHPGMSNGKKANNGENSESLSCLLTMGNSCKSLEKSDNVKRHRFLLFGQPILTEQQISRSCSSDKLSQNVTEKDLPDENRDKAKLKLGDSQSGLSQQFSPGKSSNSVEYSWQLGFNNGHCKVFMESEDVGRTLDLSCLGSYEELYRRLANMFGIERSTMLRHVIYYDASGAVKQTGLEPFSDFMKTAKRLTILTDSGSKEF 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1169 677 FunFam Auxin response factor 109 213 - -
Lele09g1169 677 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele09g1169 677 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Lele09g1169 677 ProSiteProfiles PB1 domain profile. 593 673 IPR000270 GO:0005515
Lele09g1169 677 Gene3D - 591 677 - -
Lele09g1169 677 SUPERFAMILY DNA-binding pseudobarrel domain 105 212 IPR015300 -
Lele09g1169 677 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Lele09g1169 677 Gene3D - 314 387 - -
Lele09g1169 677 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 672 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele09g1169 677 FunFam Auxin response factor 314 387 - -
Lele09g1169 677 SMART B3_2 111 213 IPR003340 GO:0003677
Lele09g1169 677 Gene3D - 109 213 IPR015300 -
Lele09g1169 677 CDD B3_DNA 110 211 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1169 Lele-ChrLele09 20775752 20778425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1169 4 675 B3 DNA Binding Superfamily AT4G30080 57.956 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele09g1169 B3 1.1e-21 CL0405