Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1150 ATGGCTGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACCGGCAGAGAGCAAACCTTCGTAGCCTCCGTTGCTTCCCCGATGGTCCCTTCCGACCATACCGCCAATTTCGCTCTCCCCGTTGATTCTGAGCACAAAGCTAAAGTCTTTAAGCTCTTCTCTTTTGCCAATCCCCACATGAGAACCTTCCACCTCTCCTGGATTTCCTTCTTCACTTGCTTCGTCTCAACCTTCGCGGCAGCCCCTCTGGTTCCCATAATCCGTGACAACCTTAACCTCACCAAGTACGACGTCGGGAATGCGGGAGTCGCCTCCGTCTCCGGCAGCATATTCTCCAGGCTTACGATGGGTGCAGTTTGTGACCTCTTAGGTCCACGTTACGGCTGTGCCTTTCTCATCATGCTCACCGCGCCAACGGTATTCTGCATGTCGTTTGTGCAAGATGCCTCTGGTTACATAGCGATACGGTTCATGATAGGGTTTTCGTTGGCCACTTTTGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATCGTAGGGCTTGCGAACGGGACGGCGGCCGGGTGGGGCAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCATTGGTATATGAATTGATCAAAAGAGCTGGATCTACCCCTTTTGTTGCCTGGAGAATCGCCTTCTTCGTCCCTGGTTGGATGCATGTCATCATGGGAATCCTCGTTTTGACCCTCGGCCAAGACCTGCCCGATGGCAACCTCGGTGCTTTGCAGAAGAAGGGTAGTGTCGCCAAGGACAAGTTCTCCAAGGTGTTGTGGTATGCGATAACGAATTACAGGACATGGATTTTTGCTCTATTGTACGGGTACTCTATGGGAGTTGAATTGACCACTGATAATGTGATTGCTGAATATTTCTATGATAGGTTCAATCTGAAGCTACACACCGCCGGAATCATTGCCGCTTCATTCGGAATGGCTAACTTCGTTGCTCGTCCTTTTGGCGGCTACACTTCCGATCTTGCTGCTCGTTTATTTGGGATGAGAGGAAGGCTTTGGAACCTCTGGATTCTTCAAACTTTAGGAGGAGTTTTCTGTATATGGCTGGGACGTGCCAATTCTCTTCCCATCGCCATCGTCGCCATGATTCTATTCTCCATCGGAGCTCAAGCTGCGTGCGGTGCAACTTTCGGCATCATCCCTTTCATCTCAAGGCGGTCTCTGGGCATCATCTCGGGTTTAACTGGGGCAGGTGGGAACTTCGGCTCGGGGCTAACCCAGTTGGTCTTCTTCTCGACCTCAAGTTTCTCCACCTCGGCTGGTCTGTCGTGGATGGGTGTTATGATAGTGGCCTGCACACTTCCGGTGACTCTGGTTCACTTCCCTCAGTGGGGAAGCATGTTCCTTCCTCCAACTAAAGACGTTGACAAGTCAACAGAAGAGTACTATTATGCATCTGAATGGAACCAAGAGGAGAGAGAGAAGGGTTTGCACCAGCAGAGTCTCAAGTTCGCAGAGAACAGCCGTTCCGAGAGAGGCAAGCGAGTAGCCTCTGCTCCGACGCCACCTAACACAACTCCGACTCATCAAGTTTAA 1596 0.5107 MAEIEGFPGSSMHGVTGREQTFVASVASPMVPSDHTANFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVQDASGYIAIRFMIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRAGSTPFVAWRIAFFVPGWMHVIMGILVLTLGQDLPDGNLGALQKKGSVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANFVARPFGGYTSDLAARLFGMRGRLWNLWILQTLGGVFCIWLGRANSLPIAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSSFSTSAGLSWMGVMIVACTLPVTLVHFPQWGSMFLPPTKDVDKSTEEYYYASEWNQEEREKGLHQQSLKFAENSRSERGKRVASAPTPPNTTPTHQV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1150 531 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Lele09g1150 531 FunFam High affinity nitrate transporter 57 254 - -
Lele09g1150 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Lele09g1150 531 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Lele09g1150 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Lele09g1150 531 MobiDBLite consensus disorder prediction 490 513 - -
Lele09g1150 531 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Lele09g1150 531 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Lele09g1150 531 SUPERFAMILY MFS general substrate transporter 58 460 IPR036259 -
Lele09g1150 531 MobiDBLite consensus disorder prediction 490 531 - -
Lele09g1150 531 FunFam Nitrate transporter 2.1 265 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1150 Lele-ChrLele09 20590385 20592194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1150 1 529 Inorganic Solute Cotransporters AT5G60770 81.285 0.0 903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0266 29 1568430 1570732 Lele09g1150 09 20590385 20592194 CCT
Lele30g1147 30 14414315 14417050 Lele09g1150 09 20590385 20592194 CCT
Lele09g1150 09 20590385 20592194 Lele11g1151 11 18779524 18781333 hybridization