Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1147 ATGGAAGAAATACAATCTCAATCGGATCATTATAGATCTTCATCTTCATCAGTGAGTAGCCCAGCAAGTAGGGTTCCATCAAGTAACTTCTTCTACCTGCGTAAACCCGGTTCACTCAGACAACCAATCTCGTTTGAGGATTCACCTGAGTGGGATGATACTGATACTGACGTTAGGATCGAAAGAGGTGATTCTATTCATGTTGCTACTGCACCAGTTTCCCCGTCTCTTTCAAAGCTCAACAGTGAGTCCTTGCCATCCCCACATCTACCTGAAGGTCCAGCAGTTCCACGAAAAGTTGCAGGAGCTTCCATTATGTGGAAGGACTTGACTGTTACAATAAAGGGAAAAAGGAAATACTCTGATAAGAAAAAGAATGTGGTTGAGGATGCCATTCATGCAATGTCTTTGGGGGATTATGCTAATAAACTTATTGGTGGACATTGCTACATGAAGGGCCTTTCAAGTGGGGAGAGAAGGCGTGTTAGCATTGCCAGGGAGCTGGTGATGAAGCCACATATCTTATTTATAGATGAGCCCCTTTATCATCTAGACAGTGTCTCAGCACTTTTGATGATGGTTACATTGAAGAAACTTGCAAGCACTGGTTATACTCTTATTTTCACCATCTATCAGAGTAGCACAGAAGTCTTTGGCCTTTTTGATCGAATCTGTCTGCTTTCTAATGGAAATACACTGTTCTTTGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGCCCTATCATGCAAAGTCCTTCTGATCACTTTCTCCGTGCAATTAATACAGATTTTGACAGGATAATTGCAATGTGCAAAAATTGGCAGGATGACAATGGGGAGTTTTCTTCTGTAAACATGGACACTGCTGTAGCTATACGTACACTTGAAGCAACGTATAAATCATCTGCAGATGCAGCTGCTGTTGAAACTATGACTTTGAAACTTATTGAGAAGACTAGAGTTGCGGCAATTTTTGTATTTGTATCATTCTGCTCCCTTCTAAGCATTGCTGGCGTGCCTTCACTTTTGAAAGAAGTCAAGATATATGCCTGTGAAGAATCGAACCAGCACTCTGGTGCATTAGCATTTTTACTTGGGCAACTCCTCTCCAGCATCCCTTTCCTATTTCTCATCTCCATTTCATCGAGCCTCGTGTTCTATTTCCTAGTAGGGCTGCGAGACGAGTTTAGCTTGCTGATGTACTTTGTGCTCAACTTTTTCATGTGTCTGTTAGTGAATGATGGACTAGTGCTAGTCATTGCTTCTCTATGGCAAGATGCCTTCTGGAGTGTTTTGACCCTGCTGTGCATACATGGTCTTTTGGAGAATGAGTACCTAGGGACGTTTTTGGCTGTTGGGCAGGGAGAAAAACATCCCTCCTTAAAAGTTTTCCATGTTGTAATCGGGATACAACAAATGCAAGATGAGTTATAG 1452 0.4208 MEEIQSQSDHYRSSSSSVSSPASRVPSSNFFYLRKPGSLRQPISFEDSPEWDDTDTDVRIERGDSIHVATAPVSPSLSKLNSESLPSPHLPEGPAVPRKVAGASIMWKDLTVTIKGKRKYSDKKKNVVEDAIHAMSLGDYANKLIGGHCYMKGLSSGERRRVSIARELVMKPHILFIDEPLYHLDSVSALLMMVTLKKLASTGYTLIFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGEFSSVNMDTAVAIRTLEATYKSSADAAAVETMTLKLIEKTRVAAIFVFVSFCSLLSIAGVPSLLKEVKIYACEESNQHSGALAFLLGQLLSSIPFLFLISISSSLVFYFLVGLRDEFSLLMYFVLNFFMCLLVNDGLVLVIASLWQDAFWSVLTLLCIHGLLENEYLGTFLAVGQGEKHPSLKVFHVVIGIQQMQDEL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1147 483 Pfam ABC-2 type transporter 326 433 IPR013525 GO:0016020|GO:0140359
Lele09g1147 483 Gene3D - 103 249 IPR027417 -
Lele09g1147 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 259 IPR027417 -
Lele09g1147 483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 254 IPR003439 GO:0005524
Lele09g1147 483 MobiDBLite consensus disorder prediction 8 26 - -
Lele09g1147 483 Pfam ABC transporter 112 181 IPR003439 GO:0005524
Lele09g1147 483 MobiDBLite consensus disorder prediction 71 85 - -
Lele09g1147 483 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524|GO:0016887
Lele09g1147 483 MobiDBLite consensus disorder prediction 71 95 - -
Lele09g1147 483 MobiDBLite consensus disorder prediction 1 26 - -
Lele09g1147 483 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 122 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1147 Lele-ChrLele09 20575308 20580603 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1147 09 20575308 20580603 Lele11g1150 11 18764876 18770161 hybridization
Lele09g1147 09 20575308 20580603 Lele12g0174 12 1348175 1354360 hybridization