Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1146 ATGGCAAAACTCAGAAGTAGCAGCAGTAAAAAGAAAGGTGGGATCGTGAAGCTGAAGGTCGTGGTAGAGAAGATCCAAAAGAAGCTGTTACCGGGTACGAAATCGAGTTCCTCATATCGAGATGCATGCGAAGAAGAAGAAGGTAGTGATGATTCGAGCTATGTCCCAGAAGATGTGAAAGAAGGGCATTTTGCAGTGATTGCTGAAGATGGAGAGGAGCCAAGGAGATTTGTGGTGCCACTAAGCTGTTTAACGCACCAGTCGTTTTTGAGGTTATTGGAGGAAGCAGCGGAAGAATATGGGTTTGATCAAGAAGGTGCACTAACCATTCCTTGCAGCCCGAGAGAGCTTGAGAAGATATTGGAGGGAAACTGTGAAAGTGATACATCAGTTAGCTGGAATGCTTGTAAACCCATGGTTCAAACCTACTCTTGA 435 0.4506 MAKLRSSSSKKKGGIVKLKVVVEKIQKKLLPGTKSSSSYRDACEEEEGSDDSSYVPEDVKEGHFAVIAEDGEEPRRFVVPLSCLTHQSFLRLLEEAAEEYGFDQEGALTIPCSPRELEKILEGNCESDTSVSWNACKPMVQTYS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1146 144 Pfam Auxin responsive protein 40 122 IPR003676 GO:0009733
Lele09g1146 144 MobiDBLite consensus disorder prediction 31 56 - -
Lele09g1146 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1146 Lele-ChrLele09 20571236 20571670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1146 20 138 Calmodulin-binding Proteins AT5G20810 40.164 4.73e-17 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1146 09 20571236 20571670 Lele11g1149 11 18761280 18761708 hybridization
Lele09g1146 09 20571236 20571670 Lele12g0175 12 1357816 1359537 hybridization